Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B0223 |
Symbol | hrpB |
ID | 6796368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 226794 |
End bp | 229268 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642774526 |
Product | ATP-dependent RNA helicase HrpB |
Protein accession | YP_002145190 |
Protein GI | 197247716 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTACAAT GCGGCGCAAA GAAAGTTAAC CCCGTGGAGC CGTTTGTGAC GTCATTGCCC GTTGCCGCCG TATTGCCTGA ATTGTTGACA GCCCTAAAAA CCGCGCCGCA GGTTTTGTTG TCCGCGCCTA CCGGGGCGGG GAAATCCACC TGGCTGCCGT TGCAACTCCT GCAACAAGGT CCGGTTGCTG GAAAAATCCT CCTGCTTGAA CCGCGTCGTC TGGCGGCGCG TAATGTCGCC CAGCGTCTGG CGGAAGCGTT GAATGAAAAG CCTGGCGAAA CGGTAGGTTA CCGGATGCGC GCGCAAAGCT GCGTGGGGCC GCGTACCCGG CTGGAAGTGG TGACCGAAGG CGTATTGACC AGAATGATTC AGCGCGATCC CGAATTACGC GGCGTGGGGC TGGTGATACT GGATGAATTT CATGAGCGCA GTTTACAGGC GGATTTAGCG TTGGCGCTGT TGCTGGATAT CCAGCAAGGG CTCCGTGACG ATCTCAGGCT GTTAATCATG TCTGCGACGC TGGATAACGA TAGGCTTTGT CAGCGACTGC CTGATGCGCC GACGATCGTC TCGGAGGGGC GCGCGTTCCC GGTGGAGCGA CGTTATCAGC CGCTTGCGGC GCATTTGCGT TTTGATGAAG CCGTCGCGAT GGCGACAGCG GAACTGCTGC GCAATGAAAA CGGTTCGCTG CTGCTATTTT TACCCGGCGT AGGCGAAATA CAGCGCGTTC ATGAACATCT GGCGTCGCGG GTAGGGAGCG ATGTCCTGCT TTGTCCGCTG TATGGCGCAT TGTCTCTGGA AGCGCAACGC AAAGCGATTG TTCCCGCCCC CGCCGGGATG CGTAAAGTGG TGTTGGCGAC TAACATTGCC GAAACCAGTT TGACGATTGA AGGGATTCGT CTGGTCGTCG ATAGCGCTCA GGAGCGCGTG GCGCGATTCG ACGCGCGAAC GGGACTGACG CGGCTGGTTA TGCAGCGTAT CAGTCAGGCG TCAATGACGC AGCGCGCGGG GCGCGCCGGA CGACTGGCGC CGGGTATCTG TTTACATCTG CTGGCCAAAG AACAGGCGGA GCGGGCGGCG GCGCAAAGCG ATCCGGAAAT CTTACACAGT GACCTTTCCG GTTTGTTGAT GGAGGTGTTG CAGTGGGGAT GTCACGATCC GGCATCGCTT TTCTGGCTGG ACAGACCGCC GGAGGTGAAT CTTCAGGCCG CCCGCCGTTT ATTATTGATG TTAGGCGCGC TGGAGGGCGA GCGGTTAAGC GCGCGGGGGC GGAAAATGGC GGCAATGGGT AACGATCCGC GCCTGGCGGC GATGTTAGTC AACGCCGACG AGGGCGACAG CGCCGCCACC GCCGCCATGC TCGCGGCCAT CCTTGAGGAC CCGCCGCGCG GCGGCGGTAC GGATTTAAGC GTGCTATTTT CGCGGCGACA GCCGGGCTGG CAGCAGCGTA GCCAGCAGCT TTTAAAACGG CTGCAGGTGC GTAATGGCGA GCCGGATAGC GCGCTTATTA TGCCGCTGTT GGCCAGAGCG TTTAGCGACC GCATCGCGCG GCGTCGTGGT CAGGAAGGGC GCTATCAGTT AGCCAATGGT ATGGGCACGA TGTTAGATGC GGATGACGCG TTGGGACGTC ATGAATGGCT GATCGCGCCG CTGTTGCTGC AAGGTAGCGC CTCGCCGGAC GCCCGAATAT TGTTGGCGCA GCCGCTGGAT ATTGCCTCGC TGATTCAGGC GTGTCCTGAT TTACTGCGCC AGTCTGACAC GGTTGAATGG GACGAAGCGC AGGGAACGTT GAAAGCGTGG CGCAGAATGC GTATTGGACA GTTGACGGTT AGCGTTCAGC CACTGGCGAA ACCGTCTGAA GAGGAGCTTC ATCAGGCGAT GCTGAACGGC ATCCGCGATA GAGGTCTGGC CGTCCTTAAC TGGACGCCGG AAGCGGAGCA GTTCCGTCTG CGTCTGCACT GTGCGGCGAA ATGGTTGCCG GAATATGACT GGCCTGCCGT GGATGAGGCG TCGCTGCTGG CGACTCTGGA AAACTGGTTG CTGCCGCACA TGACAGGCGT ACAGTCGTTA CGGAGTCTGA AATCTCTGAA TGTGACTCAG GCGTTACGGG GACTGCTTGA CTATGCCATG CTGCAACGTC TGGATAGTGA ACTGCCTGGG CATTACACTG TGCCGACGGG AAGCCGAATA ACGATTCGTT ATCATGAAGA TAACCCGCCC GCACTGGCGG TCAGAATGCA GGAAATGTTT GGCGAAGCGA AGACCCCAAC CATCGCTCAG GGCCGCGTGT CGCTGGTGCT GGAACTGCTT TCGCCTGCGC AGCGACCGCT ACAGATTACG CGCGATTTAA GCGCTTTCTG GCAGGGGGCG TATCGCGAAG TGCAAAAAGA GATGAAGGGC CGTTACCCCA AACATGTCTG GCCGGACGAT CCGGCGAATA CGGCCCCAAC GCGGCGCACG AAGAAGTATT CGTGA
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Protein sequence | MLQCGAKKVN PVEPFVTSLP VAAVLPELLT ALKTAPQVLL SAPTGAGKST WLPLQLLQQG PVAGKILLLE PRRLAARNVA QRLAEALNEK PGETVGYRMR AQSCVGPRTR LEVVTEGVLT RMIQRDPELR GVGLVILDEF HERSLQADLA LALLLDIQQG LRDDLRLLIM SATLDNDRLC QRLPDAPTIV SEGRAFPVER RYQPLAAHLR FDEAVAMATA ELLRNENGSL LLFLPGVGEI QRVHEHLASR VGSDVLLCPL YGALSLEAQR KAIVPAPAGM RKVVLATNIA ETSLTIEGIR LVVDSAQERV ARFDARTGLT RLVMQRISQA SMTQRAGRAG RLAPGICLHL LAKEQAERAA AQSDPEILHS DLSGLLMEVL QWGCHDPASL FWLDRPPEVN LQAARRLLLM LGALEGERLS ARGRKMAAMG NDPRLAAMLV NADEGDSAAT AAMLAAILED PPRGGGTDLS VLFSRRQPGW QQRSQQLLKR LQVRNGEPDS ALIMPLLARA FSDRIARRRG QEGRYQLANG MGTMLDADDA LGRHEWLIAP LLLQGSASPD ARILLAQPLD IASLIQACPD LLRQSDTVEW DEAQGTLKAW RRMRIGQLTV SVQPLAKPSE EELHQAMLNG IRDRGLAVLN WTPEAEQFRL RLHCAAKWLP EYDWPAVDEA SLLATLENWL LPHMTGVQSL RSLKSLNVTQ ALRGLLDYAM LQRLDSELPG HYTVPTGSRI TIRYHEDNPP ALAVRMQEMF GEAKTPTIAQ GRVSLVLELL SPAQRPLQIT RDLSAFWQGA YREVQKEMKG RYPKHVWPDD PANTAPTRRT KKYS
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