Gene SeAg_B0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B0105 
Symbol 
ID6793055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp109288 
End bp109947 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content57% 
IMG OID642774416 
Product23S rRNA/tRNA pseudouridine synthase A 
Protein accessionYP_002145080 
Protein GI197250796 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.72444e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGATGG AAAACTACAA TCCGCCGCAG GAACCCTGGC TGGTTATCCT GTATCAGGAT 
GAGCACATTA TGGTGGTCAA TAAGCCCAGC GGCCTGTTGT CCGTGCCGGG GCGTCTGGAA
GCGCACAAAG ACAGCATTAT GACGCGTATC CAGCGCGACT ACCCGCAGGC AGAATCGGTG
CATCGTCTGG ATATGGCCAC CAGCGGCGTG ATTGTAGTGG CGCTGACCAA AGCCGCGGAG
CGGGAGCTAA AACGTCAGTT CCGCGAACGT GAGCCGAAAA AGCAGTATGT GGCGCGCGTA
TGGGGGCATC CCTCCCCGGC GGAAGGGCTG GTTGACTTAC CGCTCATCTG CGACTGGCCG
AACCGGCCAA AGCAGAAAGT GTGTTATGAA ACCGGCAAAC CGGCGCAAAC GGAATATAAC
GTGGTGGAGT TTGCGGCGGA TAATACCGCC CGCGTGGTGC TCAAACCGAT CACCGGGCGT
TCGCATCAGC TTCGTGTGCA TATGCTGGCG TTAGGCCACC CGATTTTAGG CGATCGGTTT
TACGCTTCGC CGGAAGCGTT GTCGCTGGCG CCGCGTTTGC AGTTACACGC CGAAATGCTG
ACCATTACCC ATCCCGCTTA CGGTAACAGC ATGACGTTTA AAGTCCCGGC AGATTTTTAA
 
Protein sequence
MGMENYNPPQ EPWLVILYQD EHIMVVNKPS GLLSVPGRLE AHKDSIMTRI QRDYPQAESV 
HRLDMATSGV IVVALTKAAE RELKRQFRER EPKKQYVARV WGHPSPAEGL VDLPLICDWP
NRPKQKVCYE TGKPAQTEYN VVEFAADNTA RVVLKPITGR SHQLRVHMLA LGHPILGDRF
YASPEALSLA PRLQLHAEML TITHPAYGNS MTFKVPADF