| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_A0038 |
|---|
| Symbol | |
|---|
| ID | 6792700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011148 |
|---|
| Strand | + |
|---|
| Start bp | 25378 |
|---|
| End bp | 26430 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642774300 |
|---|
| Product | putative conjugal transfer protein |
|---|
| Protein accession | YP_002144964 |
|---|
| Protein GI | 197247312 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAA AAAATTATAT TAAATATATT TTTCCTTTAG GATTGCTGAT ACCCAGCGTT
GCCAATGCAG CCGCTGATTT TGAATTGCCT GTTAATATGC TCACTGATAT GTATAAGGAG
TTAACGCAAT TTATATCAAG TAATCTAAGC TCATATATCG GTGATATTAA TGAAATATTC
CTTCCACTAA TGGGGGCTGT TTTTGGCCTT TATTTTGTCT GGAAATGGGG ATTAGTTCAT
TATAAGGGTG ATCCTAATGC GATTCAGGAT ATGCTTATCA ACGGTTTAAA GTTAATCGTT
ATCATGTCTG GCCTTGTCGG TAGTGCATGG TATATAGGTA AGGTTGTTCC GTTCGTTATG
GATGCAGGTG ATGAAATAGC ATCCAGGCTG ATCGGCTCAA CGGGTACTTT CTCAGCGCTT
GAAACTGTCA TTCAACAAAT TAACGCGAAC GGTAAGCGTA TTCTTGAAGC AACAAATGAA
TTAAGTCTAT GGGATTCTGA TATATCAACA ATCCTCGCTG CGACTATGGC ATTAATTCTC
TTTTACGCAG GGGGTACAGC ATTTGTTATC TATGCCGCCG CAACAATGCT TATTGCTAAA
TTCATGGTAG GTCTACTTCT TATTGTCGGG CCACTTTATT TAATGATGGC TATGTATGAA
CAAACTGTTA CTTTCACGAA ACAATGGATA GGCCAAGCGT TTAACTATAT CCTGCTCAAT
GTTTTTGTAA CGCTGACTAT TCATATTCTT ATTGAATTTA TGAGTAACCA GTTCCCTGTA
GGTGCTGAAA TAGGTTTAGG CGGCGCTCTT TATGCCTTAA TCGCATTTTT AATGGGCGTT
TTTATCATTG GTCAGATACC GTCGTTCGTG AGTACCATCA CTGGCGGTAA TGGTATCAGT
GGGATTACTG GCGCTACTAA CGCCGCAGGG GGCATGATGT TTAATACAGC GTCAGGTGTT
GGGGGTATGG CTGGACGGTC TTTAGGTAAA GGCGTTGGCA AACTCGCACA GGCAGGAATG
GGTAAATTGC GTGGCGGTGT GAAAGCTGGC TGA
|
|---|
| Protein sequence | MELKNYIKYI FPLGLLIPSV ANAAADFELP VNMLTDMYKE LTQFISSNLS SYIGDINEIF
LPLMGAVFGL YFVWKWGLVH YKGDPNAIQD MLINGLKLIV IMSGLVGSAW YIGKVVPFVM
DAGDEIASRL IGSTGTFSAL ETVIQQINAN GKRILEATNE LSLWDSDIST ILAATMALIL
FYAGGTAFVI YAAATMLIAK FMVGLLLIVG PLYLMMAMYE QTVTFTKQWI GQAFNYILLN
VFVTLTIHIL IEFMSNQFPV GAEIGLGGAL YALIAFLMGV FIIGQIPSFV STITGGNGIS
GITGATNAAG GMMFNTASGV GGMAGRSLGK GVGKLAQAGM GKLRGGVKAG
|
|---|
| |