| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4059 |
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| Symbol | |
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| ID | 6780922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4612697 |
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| End bp | 4614310 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642770052 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_002140845 |
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| Protein GI | 197120418 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.082021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAC GTCTCATCAT AGCGGTACTC CTCTCCATCG GGGTCCTCTA CGCTTACTCT
TTCATTTTCC CGACGCCCAA ACCGCTAACT GCGCCAGGCG CCAAACAGGC AGCCATGAGC
TCCGCCTCCG CTCCTGCTTT ACCGGCGGCA GTTGCACCGA CCGCAGGCAC CGCGCCCCTC
GCTGCGCCCG CACCCCAGGC GGGGCAGGCG CCAGCTGTTG CCAAGGATGT TACCGTCGAC
ACCGATCTCT ACACCGCCGT GTTCTCCACC CAGGGGGGCG GTCTCAAAAA GTTCGTCCTC
AAGAAGTACA AGGAGACTGT CGGCCCCCAG GGAAAGGACA TCGTTCTGGT CAACGAGACC
GCAGCCAACC GCTATGCGCT TCTCAGCGAC TCCCGGGAAT TCGGCCTCTC CCCTGACGCC
CTTTACAGCG CAAGCACCGG TGAGGTCAAG GTCACGAACG GCGGCAAGGG ATCCCTCGAA
TTCACCACCA CCACTTCGCA GGGGATCACC TTCAGGAAGG TCTATACCTT CTCCGGCGAC
GCCTACCGTA TCGGCCTTAC CGAGGAAGTA CAAAACGCAG GGAATGTGGC GCTGACCGGG
GCCGTGCACC TGCTGCAGAC TTCTCGCGTC GTTGAAGCGA AGAAGGAGGG GAGGTACGAA
GTTCATGCAC CCTCGACCCT CAGCGAAGGG AAGGTGAAGG TCGACAAGCT GGACAACCTG
CTCAAGAACC CGGTTCAGTA CGGGAAGGAC ATCGCCTGGT CCGCGTTTGC CGATAAGTAC
TTCATGGACG GCATCATCGC GGACAAGGGG AGCATCAGCC AGGTTCGCAT CACGCGCCCG
GCCAATGACG CCATTCAGCG CGACATCGTT TCGCCCACTG TCACCGTGGC ACCTGGTCAG
CGTTCCGCTG TCAATTACGC CGTCTACTAT GGCCCGAAGG ATCTCGACAT CCTGAAGCTG
CAGGGTAACC GTCTGGATGA AGTAATAGAC TACGGCTGGT TCGGTCCCAT TGCGAAGCCG
CTGGTTCATT CGCTCAAATT CCTTTACAAG TACACCGGCA ACTACGGCAT CGCCATTATC
ATCATCACCT TCATCCTGAA ACTTGTCTTC TTCCCGCTCA CCCACAAGAG CTACAAGTCG
ATGAAGGACA TGCAGAAGCT GCAGCCCAAG ATGACTGAGC TGAAGGAGAA GTTCAAGAAC
GACCGCGACG CCATGAACCG CGCCGTGATG GAACTGTACA AGACCCACAA GGTCAACCCG
CTCGGCGGCT GCCTGCCGAT GGTAGTGCAG ATCCCGGTGT TCTTCGGACT CTACCGCGCG
CTGATGTACT CCATCGAGCT GCGCCACGCT CCTTTCTATC TCTGGATCAC TGACCTCTCC
GCCAAGGATC CGTACTACGT GACCCCGATC ATCATGGGCG TCACCATGTT CATCCAGCAG
AAGATGACCC CGACCAACAT GGATCCGGTG CAGGCCAAGA TGATGCTCAT GCTTCCCATC
GTCTTCACCT TCATGTTCCT GAACTTCCCG TCCGGCCTCG TCATCTACTG GCTGGTGAAC
AACGTGCTGA CCATCGCTCA GCAGATGTAT ATCAACAAAG CCGTAGCAGA CTAA
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| Protein sequence | MEKRLIIAVL LSIGVLYAYS FIFPTPKPLT APGAKQAAMS SASAPALPAA VAPTAGTAPL
AAPAPQAGQA PAVAKDVTVD TDLYTAVFST QGGGLKKFVL KKYKETVGPQ GKDIVLVNET
AANRYALLSD SREFGLSPDA LYSASTGEVK VTNGGKGSLE FTTTTSQGIT FRKVYTFSGD
AYRIGLTEEV QNAGNVALTG AVHLLQTSRV VEAKKEGRYE VHAPSTLSEG KVKVDKLDNL
LKNPVQYGKD IAWSAFADKY FMDGIIADKG SISQVRITRP ANDAIQRDIV SPTVTVAPGQ
RSAVNYAVYY GPKDLDILKL QGNRLDEVID YGWFGPIAKP LVHSLKFLYK YTGNYGIAII
IITFILKLVF FPLTHKSYKS MKDMQKLQPK MTELKEKFKN DRDAMNRAVM ELYKTHKVNP
LGGCLPMVVQ IPVFFGLYRA LMYSIELRHA PFYLWITDLS AKDPYYVTPI IMGVTMFIQQ
KMTPTNMDPV QAKMMLMLPI VFTFMFLNFP SGLVIYWLVN NVLTIAQQMY INKAVAD
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