| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4052 |
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| Symbol | |
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| ID | 6780915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4603273 |
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| End bp | 4604508 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642770045 |
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| Product | L,L-diaminopimelate aminotransferase |
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| Protein accession | YP_002140838 |
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| Protein GI | 197120411 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAAAA TTAACGATAA CTACCTGAAA CTTAAAGCAG GATACCTTTT CCCCGAGATC
GGCCGCCGCG TGCGAGCCTT CGCCGCTGCA AACCCGGAGG CGAAGGTGAT CCGCCTTGGG
ATCGGCGACG TGACCCAGCC GCTTACCCCG ACAATCCTCA AGGCGTTCCA CGATGCCGTG
GACGATCTCG CCAGCGAGAA CTCCTTCATG GGTTACGGTC CGGAGCAGGG GTATGACTTC
CTGATCGACG CCATCATCGA GAAGTCCTAC AAGCCTTTGG GCGTCGACCT GAAGACCACG
GAGATGTTCA TCTCCGACGG CTCCAAGTGC GACTGCGCCA ACATCCTGGA CATCTTCGCG
CTCGACAACA CCGTCGCCAT CGGCGACCCG GTCTACCCGG TTTACAACGA CACCAACGTC
ATGATCGGCC GCACCGGCGA TGCCGATGAC AAGGGGTACT ACAAGGGGCT GGTCTACATG
CCCTGCACCG AAGAAAACGG CTTCTTCCCG GCGTATCCGA AGGAGAAGGT GGACATGATC
TACCTCTGCT TCCCGAACAA CCCCACCGGC GCCGTGGCGA CCAAGGCGCA GTTGAAGGGG
TGGGTCGATT ACGCGCTGGC CAACGACTCC ATCATCCTGT TCGATGCGGC TTACGAGGCG
TTCATCACCG ACCCCTCGAT TCCGCATTCC ATCTACGAAG TCGAAGGGGC TAAGAAGTGC
GCCATCGAGT TCCGCTCCTT CTCCAAGACT GCCGGCTTCA CCGGCGTTCG TTGTGGCCTG
GTAGTAGTTC CCGACGAGCT CGAAGGGACG ACTTCCAACG GCGAGAAGTA CAGCTTCAAC
AAGCTCTGGC TGCGCCGTCA GACCACCAAG TTCAACGGGG CTTCCTACCC TGTGCAGAAA
GCGGCCGCCG CAGTTTACAC CGAGCAGGGT TGGAAAGAGA CCCAGGCCAA CATCGATTAC
TACATGGAGA ACGCGCGCAT CATCCGCGAA GGTCTCTCAG CGGCCGGGGT TACCGTGTAC
GGCGGCGTCA ACGCTCCTTA CATCTGGCTC AAGACCCCAG CCGGGCTCAC CTCCTGGGAC
TTCTTCGACA AGCTTTTGAA TGACTGCCAC GTAGTCGGCA CCCCAGGCAG CGGCTTTGGT
CCCAGCGGCG AAGGGTACTT CCGCCTCTCG GCCTTCGGCA ACCGCGACAA CGTCGTCGAG
GCTGTCGAGA GGATCAAGAA GAACCTTAAG AAGTAG
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| Protein sequence | MAKINDNYLK LKAGYLFPEI GRRVRAFAAA NPEAKVIRLG IGDVTQPLTP TILKAFHDAV
DDLASENSFM GYGPEQGYDF LIDAIIEKSY KPLGVDLKTT EMFISDGSKC DCANILDIFA
LDNTVAIGDP VYPVYNDTNV MIGRTGDADD KGYYKGLVYM PCTEENGFFP AYPKEKVDMI
YLCFPNNPTG AVATKAQLKG WVDYALANDS IILFDAAYEA FITDPSIPHS IYEVEGAKKC
AIEFRSFSKT AGFTGVRCGL VVVPDELEGT TSNGEKYSFN KLWLRRQTTK FNGASYPVQK
AAAAVYTEQG WKETQANIDY YMENARIIRE GLSAAGVTVY GGVNAPYIWL KTPAGLTSWD
FFDKLLNDCH VVGTPGSGFG PSGEGYFRLS AFGNRDNVVE AVERIKKNLK K
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