| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4034 |
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| Symbol | |
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| ID | 6780897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4579254 |
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| End bp | 4582970 |
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| Gene Length | 3717 bp |
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| Protein Length | 1238 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642770027 |
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| Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein |
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| Protein accession | YP_002140820 |
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| Protein GI | 197120393 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGAA ACAGGAAAAC CATGGACGGC AACACCGCGG CGGCGCATGT CGCCTACGCG
CTCAGCGAGA CGGCTGCCAT CTACCCGATC ACCCCCTCCT CCACCATGGG GGAGGTCGCG
GATGAATGGG CGGCAGAGGG GCGCAGGAAC GTCTTCGGGC AGGTGCTGAA CATCAAGGAG
CTGCAGTCTG AGGCGGGAGC GGCAGGGTCG GTGCATGGCT CGCTGGTGGC GGGCGCCCTC
ACCACCACCT TCACCGCATC GCAGGGGCTT TTGCTCATGC TCCCCAACAT GTACAAGATC
GCCGGCGAGC AGCTCCCCGG CGTGTTCCAC GTCTCGGCAC GCGCCGTCGC AACCCACGCG
CTCTCCATCT TCGGCGATCA CCAGGACGTG ATGGCGGCCC GCCCCACCGG CTTCGCCCTG
CTCTGTTCCT CCTCGGTGCA GGAGGTGATG GACTTGGCCC TGGTCGCGCA TCTGGCCGCG
CTGGAGGGGA GCATACCCTT CCTGCACTTC TTCGACGGCT TCCGGACCTC CCACGAGGTG
CAAAAGATCG AGGTGATCGA GTACGAGGAG ATGGCGCGCC TTTTGAACCG CGAAAAGCTG
GCGGCCTTCC GCGCCAAGGC GATGAACCCG GAGCACCCGG AACTGCGGGG CACAGCCCAG
AATCCGGACA TCTACTTCCA GGGGAGGGAG CGCGCGAACC CGTTCTACCA GGCGCTCGCC
GCCGTGGTGA CCCAGACCAT GGACAAGGTG GGGCGGCTGA CCGGCCGGCA CTACCGCCTC
TTCGACTACA TCGGGCACGC CGAGGCGAAC CGGGTCATCG TCACCATGGG GTCCTCCTGC
GAAACGGCCG AAGAGGTGGT GCGCTACCTA AACGGCGCCG GCGAGAAGGT GGGGCTCGTC
AAGGTAAGGC TCTACCGCCC CTTCGACGCG GAGGCGCTCC TCTCGGCGAT ACCGGCGTCC
GCCTGCAAGA TCACGGTGCT CGACCGCACC AAAGAGCCCG GCTCTTTGGG CGAGCCGCTC
TACCAGGACG TCTGCACCGC CTTCATGGAG CGAGGCGGCA CGGTCCCAGA GCTCTACGCA
GGGCGCTACG GCCTGGGCTC CAAGGAGTTC CGCCCGGTGC ACGTGAAGAG CATCTTCGAC
AACATGAACG GCTCCCCGGG CAAGCGCCAC TTCACGGTGG GGATCACCGA CGACGTGAGC
AACAGCTCGC TCCCGGTTGA GGGGACCCTC TCAACCACGC CGGAGGGGAC CATCCAGTGC
CGCTTCTGGG GGATGGGTGC GGACGGGACC GTCGGGGCCA ACAAGGCCGC CATCAAGATC
ATCGGCGACA ACACTGAACT CTACGTCCAG GCCTATTTCT CCTACGACTC CAAGAAGTCC
GGAGGGATCA CCGTTTCCCA CCTGCGCTTC GGCGAAAGCC CGATCCAGTC CACCTACCTC
GTGGACGCGG CCGACTTCAT CTCCTGCCAA AAGGCCCCCT ACGTGCAGAT CTACGACCTT
CTGGAAGGGA TCAAGGAGGG GGGGATTTTC CTTTTGAACT CCCCCTGGAA CACGGTGGAG
GAAATGGAGC AGCACCTGCC GGCCGGCATG CGGCGCGACC TGGCCCGGAA AAAGGTGCGC
CTCTACAACG TGGACGCGAT CCGGATCGCC TCCGCCGCCG GGCTCGGCGG CCGCATCAAC
ATGATCATGC AGACCGCCTT CTTCAAGCTC TCCGGGGTGC TCCCCTTCGA GCGGGCCGTG
GAACTCCTCA AGGATTCCAT CCGCAAGGAG TACGGCAGGA AGGGGGATCA GGTGGTCGAG
ATGAACCTGG GCGCGGTCGA CCTCGCGGTG CAAAGCCTGG TGCAGATCGA GTACCCGGAG
TCGTGGCGCG ACGCCGACGA TGAGCGCGGG CTGGACTTCC GCCTCGCGCA GCAGATGCCC
GACTACATGC GCGAGATGGT GTTCCCCATC CTGCGCCAGA AGGGGGACGA CCTCCCGGTC
TCCGCCTTCT CCCCCGACGG CGTCTTCCCC TTCTCCACCG CGCGCTTCGA AAAGCGCGGC
GTCGCCATCA ACGTCCCGGA ATGGATCAAG GAGAACTGCA TCCAGTGCAA CCAATGCTCC
TACATCTGCC CGCACGCCAC CATCCGCCCT TTCCTCGCCA CCGATCAGGA ACTCTCCGGC
GCCCCGGAGA GCTTCGAGAC CATCCCCGCC AACGCCAAGG AGATCAAGGG CCACGGTTTC
CGGATCCAGG TCTACACACT GGACTGCATG GGATGCGGCA ACTGCGCCGA CATCTGCCCG
GCCAAGGTCT CCGCCTTGGT GATGAAGCCG ATCGACACCC AGTCCGAGGT GCAGGAGGTG
AACCGCAAGT TCGCCGAGAC GCTCGCCCCC AAGGGGGAGC TGATGAAGCG GAACTCGGTG
ATCGGGAGCC AGTTCCAGCA GCCGCTTTTG GAATTCTCCG GCGCCTGCTC CGGCTGCGGC
GAGACCCCCT ACGCCCGCAT CGTCACCCAG CTTTTCGGTG AGCGGATGAT GGTCGCCAAT
GCCACCGGCT GCAGCTCCAT CTGGGGCGCC TCGGCTCCGG TCTCCCCCTA CTGCGCCAAC
GCGCAAGGGC ACGGCCCCGC GTGGAACAAC TCACTCTTCG AGGACGCGGC CGAGTTCGGC
TTCGGCTACC ACATGGCAAT CTCGCAGCGG CGCTCGCTCC TGGCCGACCA GGTGCGCCAC
GCAGTCCAAA GCCTCCCGGA GGGGGAGCTG CATGAGGAGT TATCCGGCTG GCTGCAAGGG
ATGATGGACC CCGAGCTCTC CCGGCGCCAC GGCGACCGGT TGAAGGTGCT CCTTCCGCAA
GCGGGGAACA ACGAGTTGCT GCAGCAGATC CTATCGTCGG CCGACCTCTT CACCAAGAAA
TCGATCTGGA TCTACGGCGG CGACGGCTGG GCCTACGACA TCGGCTTCGG CGGCCTGGAC
CACGTCATCT CCACCGGCGA GGACGTGAAC CTTCTGGTGA TGGATACCGA GCTCTACTCA
AACACCGGCG GGCAGTGCTC CAAGGCCACC CAGTTGGGCG CCATAGCGCG TTTCGCCGCT
GCAGGGAAGC GGACCTCCAA GAAGGATCTC GGGCGCATGG CGATGACCTA CGGTTACGTC
TACGTCGCCT CCATCGCCAT AGGCGCCGAC AAGAACCAGA CCCTGAAGGC GCTCGCCGAG
GCGGAAGCCT ACCCCGGGCC TTCGCTGGTG ATCGCCTACT CCACCTGCAT CAACCAGGGG
CTCAGGAAGG GGATGGGGAA ATCGATCGAG GAGAGCAAGC TGGCGGTGAA GTGCGGCTAC
TGGCCGCTGT ACCGCTACAA CCCGCTTCTG AAGCTGGAAG GGAAGAACCC GTTCGTACTG
GAATCGAAAG AGCCCGACGG CTCCCTCGCC GAATTCCTCT CCGGGGAGGT GCGCTACCAG
GCACTGGAGA AACAGAACCC CGAGGTCGCG AGCGAATTGC GCCAGCAGAT GGAGCAGGAG
GCGCTAGAGC GCTTCCGGGT GCTGAAGGAA ATGGCTGACT GGCAGCCGAC GACAGGCGAC
GTCCCGGAAG ATGGCGGGAG GAGCCACGAC CACGTTCCCG CCGCGGCAGG CGCCGCCGAG
GAGCCGGCAC CGGTCTGCGT CAGTGCCACC AGCGACCCCC GCTACAGCCG TCCCGGCCAG
CCCGAGGAAG AGTGCGACGA CGGCCGCGCC GGCATCGACA AGAAGATCAA GGAGTGA
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| Protein sequence | MSGNRKTMDG NTAAAHVAYA LSETAAIYPI TPSSTMGEVA DEWAAEGRRN VFGQVLNIKE
LQSEAGAAGS VHGSLVAGAL TTTFTASQGL LLMLPNMYKI AGEQLPGVFH VSARAVATHA
LSIFGDHQDV MAARPTGFAL LCSSSVQEVM DLALVAHLAA LEGSIPFLHF FDGFRTSHEV
QKIEVIEYEE MARLLNREKL AAFRAKAMNP EHPELRGTAQ NPDIYFQGRE RANPFYQALA
AVVTQTMDKV GRLTGRHYRL FDYIGHAEAN RVIVTMGSSC ETAEEVVRYL NGAGEKVGLV
KVRLYRPFDA EALLSAIPAS ACKITVLDRT KEPGSLGEPL YQDVCTAFME RGGTVPELYA
GRYGLGSKEF RPVHVKSIFD NMNGSPGKRH FTVGITDDVS NSSLPVEGTL STTPEGTIQC
RFWGMGADGT VGANKAAIKI IGDNTELYVQ AYFSYDSKKS GGITVSHLRF GESPIQSTYL
VDAADFISCQ KAPYVQIYDL LEGIKEGGIF LLNSPWNTVE EMEQHLPAGM RRDLARKKVR
LYNVDAIRIA SAAGLGGRIN MIMQTAFFKL SGVLPFERAV ELLKDSIRKE YGRKGDQVVE
MNLGAVDLAV QSLVQIEYPE SWRDADDERG LDFRLAQQMP DYMREMVFPI LRQKGDDLPV
SAFSPDGVFP FSTARFEKRG VAINVPEWIK ENCIQCNQCS YICPHATIRP FLATDQELSG
APESFETIPA NAKEIKGHGF RIQVYTLDCM GCGNCADICP AKVSALVMKP IDTQSEVQEV
NRKFAETLAP KGELMKRNSV IGSQFQQPLL EFSGACSGCG ETPYARIVTQ LFGERMMVAN
ATGCSSIWGA SAPVSPYCAN AQGHGPAWNN SLFEDAAEFG FGYHMAISQR RSLLADQVRH
AVQSLPEGEL HEELSGWLQG MMDPELSRRH GDRLKVLLPQ AGNNELLQQI LSSADLFTKK
SIWIYGGDGW AYDIGFGGLD HVISTGEDVN LLVMDTELYS NTGGQCSKAT QLGAIARFAA
AGKRTSKKDL GRMAMTYGYV YVASIAIGAD KNQTLKALAE AEAYPGPSLV IAYSTCINQG
LRKGMGKSIE ESKLAVKCGY WPLYRYNPLL KLEGKNPFVL ESKEPDGSLA EFLSGEVRYQ
ALEKQNPEVA SELRQQMEQE ALERFRVLKE MADWQPTTGD VPEDGGRSHD HVPAAAGAAE
EPAPVCVSAT SDPRYSRPGQ PEEECDDGRA GIDKKIKE
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