Gene Gbem_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_4006 
Symbol 
ID6780870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp4548675 
End bp4549283 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content59% 
IMG OID642770001 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002140794 
Protein GI197120367 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTTG TAACCACAGA GATCGAGCCC GAACCGGGGG CCAGGGAGAG GCTCCTTTTC 
TCCGCGCTGA CGCTGTTCAA CGAGAAGGGA TACGCTGCCG CCTCGGTGCG CGAGATTGTG 
GAAAAGGCCG GGGTGACCAA GCCGGTTCTC TACTACTACT TCGGGAGCAA GGAAGGGATC 
TACCTGGAGT TGATGGAGAC CTCGTACCAG ATACTGGACT CCATGGCCGC CAGGGCGTTT 
TCCTTGGCCG GGTTCGCACA AGAGAAGATC ATCCAGTTCT GCGGCGATCT CTTCGACATA 
TCCATCGAGA GCCTCCCCAT GGTTCGACTG ATCAACTCCA TCTACTTCGG GCCTCCCCAG 
GGGACGCCCA AGTTCGACCT GGATGTCTTT CCTGCCAGAT TGACGGAGGT GCTGCAGCAG 
TTGGTGAGTT CCGGCATGAG AGAGTCCGAG CTGAAAGAAG GGAGCGTCGA GGACGTGGCC 
GGTGCGGTCA TGGCCATCGT CACCTCGACC ATAAACGAGC AGATCTGCTG CAGGGAGAAC 
AAACCGGACC GCGACACGAT GGTGAGGATG CTCCGGTTGC TGATGACCGG CATCGCCCCG 
ACTCAATAA
 
Protein sequence
MTVVTTEIEP EPGARERLLF SALTLFNEKG YAAASVREIV EKAGVTKPVL YYYFGSKEGI 
YLELMETSYQ ILDSMAARAF SLAGFAQEKI IQFCGDLFDI SIESLPMVRL INSIYFGPPQ 
GTPKFDLDVF PARLTEVLQQ LVSSGMRESE LKEGSVEDVA GAVMAIVTST INEQICCREN 
KPDRDTMVRM LRLLMTGIAP TQ