| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4002 |
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| Symbol | |
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| ID | 6780866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4540417 |
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| End bp | 4542714 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642769997 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_002140790 |
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| Protein GI | 197120363 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0248889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGCC GGAAGGGACA AAACCTCCTG GAGCAAGCAT TAACTATTGC CCAGGCCCCA
GGTCGGTCCC ATCAGGTCCG CCTCAACAGC CTGCTTCGCC TGGCGGCCCG TTGGCATTCC
CTCGCCTCGG CCACCATCTA TCTCCCCGAT CCCAAAGGGG TGGTGTTGCA GCGTCGCTTC
AGCACGCTGG CCACCCCCTC CGGCCACAAC TGCCACATCC CTTACGGCGT GGGTCTCGCC
GGGCGCACCG CCGCCACCCT TTCACCCCAA TCCGCCAGTG CCGACCTGCT TCATCCCGAC
GAGCCCTGTT CCGGCAACGG CTCCATCGCT GCGCTCCCCC TTTTGGACGG GGACCGGCTC
TTCGCCGTGC TGGCGCTGGA GAGCGGCGCC GCGGAAGTCG CCCGGGAAGC CGTCGACGCG
GCCGGTACCC TGGCGCCCGT CTTCTCCCTG ACCGTAGCCC GCATGGCCGC AGCCGAAGAG
GCTGAGGAGG CGCAGCGCAA CCTGTCGCTA CTTTCGGCGC TGGCCAAGCT CTTGAGCTCG
CCGCAGCCGC GCGGGGTGCT GCTGCACCGG TTGATGCAGC TTTGCACCAG TTCCGGCCTC
TCCAGTTGCG CCATCGTCCG CTTGAAGCAG AGGAATTCCG GCAAGGAGAG GGTGATCCGG
AGCTGCCGCA GGGGAATGGG CGACAAGCTC CCCGACCTGC TGGAAAAAGA AGCTGCCCTG
GCGGTCCATG TCTGCGCCAC CGAGACCACC TGCGCCGAGG AACTCGGAGA CGACTCCAGC
TACCGGTACG CCCTCTGCAC CCCGCTGGGA AGCAACGGCG CGGCGCTGGG GACCATGACC
CTCTTCGGGG GGCCCGAACT GACCGCGCCC AAGCAGATCG AGCTTGCCGA AACGGTCGCG
CGACTTTTGT CCGGCGCCAT GGCCGAGGCG ATCTGCAAGG AGCAGATCAA GACCTACGAC
AGCGAGAACG AGAAGAAGCT GAAAGAGCTG TCCCTTCTCT ACCGGATGAG CAACACCATG
CTCTCCACCA TCCAGCTGAA CAAACTGATC CACCTCACCC TGACCGCGCT CACCTCGGGT
CCCACCCCCT TCTTCGACCG GGCCATGCTC TTTCTCACCA ACGAGCGTTC CGGGATGTTG
CTCGGCATGC TGGGGGTAAC GACGGAGACC TCCCCTTCCC TCTCCAGCCA AAACGGAGGG
AGCGACGACC TCCTCTCCAG CCGGTGGGAC ATCTCCGATG AAGAGATGGC CGCCCAGCGC
AACTCCGAAT TCTGCCGGCA GGTACAGGGG AGACGGCTTG AGCTGGACGG AACGCTCAAC
ATCGCTTCCC AGGCCGTGCT GGAAAAGAGG CTGATCTACA TCCCCGAAGA AGGCGGCATC
GGCGGCCCCC TCCATTCCCG GCGCAGCGCC CTGGCCGCCT CTCCGCTCAT CGCGCATGGG
CAGGCCGTAG GGGCGGTACT GGTGGACAAC GCCCTCACCC ACAAGCCGAT CAACCAGGAG
CACCTGCGTT TCCTGCAGCT CTTCACCAAC CAGGCGGGAA TGGCCATCGA GAACTCGATG
CTCTACAACA AGATCGAGGA CGCGAACCAT CAGTTGAGCG AGGCGCAGGA GAACCTGCTC
CAGAAGGAGC GGCTTGCCGC CATCGGCGAA ATGGCCGCCG GCATCGCACA CGAGTTGAAG
GGGCCGCTGG TCTCCATCGG CGGCTTCGCC GGCAGGCTCG CCAGGAAACT CCCCCAGGAC
ACCAGCGAGT GGGCCCATGC CGACCTGATC GTGCGCGAAG TGCTCCGGTT GGAGGGAATC
CTCTCCGAGA TCCTGCTCTT TTCGAAGAAA ACCACCATCT GTTACACCCG GTGCGACCTC
TCCGAGGTCG TGAAGGAGTC GCTCGCCGTG GTCACCCCTC CACTGGAGGA GAAGCAGATC
AGCGTGAACG CCAAATTCCC GCGGCATAAG CTCTTGCTTT TGGGGGACGG ACAGCAGTTG
AAGCAGGTGT TCATCAACAT CATCCTGAAC GCCCTCGATG CCATGGGGAC AGGGGGGGCG
CTGAACATCC AGGTCTCGGC GGCCGAGATG GACGACAAGG AAGCCGTCCA GGTGAAGATA
TCCGACACCG GCGGCGGCAT CCCGCTGGAG TCCTTGAACA GCATCTTCAC CCCCTTCTTC
ACCACCAAAG GAAGCGGCAC CGGCTTGGGG CTCCCCATCG CCAACCGCAT CATCACCAAC
CACGGCGGCA AGATCCAAGT CACCAACAAC CCCGGCCTCG GGGTCGAGTT CAGGGTCATC
CTGCCCAAGC ACTGGTGA
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| Protein sequence | MAGRKGQNLL EQALTIAQAP GRSHQVRLNS LLRLAARWHS LASATIYLPD PKGVVLQRRF
STLATPSGHN CHIPYGVGLA GRTAATLSPQ SASADLLHPD EPCSGNGSIA ALPLLDGDRL
FAVLALESGA AEVAREAVDA AGTLAPVFSL TVARMAAAEE AEEAQRNLSL LSALAKLLSS
PQPRGVLLHR LMQLCTSSGL SSCAIVRLKQ RNSGKERVIR SCRRGMGDKL PDLLEKEAAL
AVHVCATETT CAEELGDDSS YRYALCTPLG SNGAALGTMT LFGGPELTAP KQIELAETVA
RLLSGAMAEA ICKEQIKTYD SENEKKLKEL SLLYRMSNTM LSTIQLNKLI HLTLTALTSG
PTPFFDRAML FLTNERSGML LGMLGVTTET SPSLSSQNGG SDDLLSSRWD ISDEEMAAQR
NSEFCRQVQG RRLELDGTLN IASQAVLEKR LIYIPEEGGI GGPLHSRRSA LAASPLIAHG
QAVGAVLVDN ALTHKPINQE HLRFLQLFTN QAGMAIENSM LYNKIEDANH QLSEAQENLL
QKERLAAIGE MAAGIAHELK GPLVSIGGFA GRLARKLPQD TSEWAHADLI VREVLRLEGI
LSEILLFSKK TTICYTRCDL SEVVKESLAV VTPPLEEKQI SVNAKFPRHK LLLLGDGQQL
KQVFINIILN ALDAMGTGGA LNIQVSAAEM DDKEAVQVKI SDTGGGIPLE SLNSIFTPFF
TTKGSGTGLG LPIANRIITN HGGKIQVTNN PGLGVEFRVI LPKHW
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