| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3993 |
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| Symbol | |
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| ID | 6780857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4530725 |
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| End bp | 4532068 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642769988 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002140781 |
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| Protein GI | 197120354 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGCGTC TCTTTATCAA AAGAAGAAGG AAACCGGTCT CGATCCGCCG CAACGTCGCG
GCGCTTTCGA TGCCGGTGCT CCTGTCGTCC CTGTTCCAGC GCCTGGTTTC CATCGTCGAC
ATCTTCATGG TCGGCGGGTT GGGAGCGGCT GCCATCGCCG CCACCGGCCT CGGCCAGTTG
CTGATCTTCG TGACCATGAC GGTGTTCTGG GGGCTTTCCA CCGGCGCCAA CGTGGTTATA
GCGCATCTTT GGGGCGCGGG GCGCCAACTT GAGGCACGCC GGGCGGGCTT CGCCTCGCTT
TTGCTTTGCG CCCTTCTCGC CGTGGCGGCG ACCCTTTTGG GGATTGGTTT CGGCAGCGAG
GTGGCAACCT TCATGGGGGC GAGCAGCGAC GTCCTGGCCT ACGCCTCGCC TTATATCCGA
CTGGTCTTTC TCTACTTCGC CTTTACCGCC GGACTCAACA TCCTCTCCGC CATCAGCCAG
GGGACCGGCA ACACCAGGAC GCCGATGGAG GCCATCCTCC TGGTCAATAT CCTGCACGTG
GTCATCGCCT ACCCGCTCAT CTACGGCAAG TTCGGCTTCC CCCGCTACGG TGTGATTGGT
GCCGCTTACG CGATCAACAT CTCGGAGGCT GCAGGATTCA TCTACCTCCT GATCCAGTCG
CTCAGGAAGG GGTATCTGAA GATTGGCCCT CCCGACATGG TGCTCCTGAA TAAAGTATGG
AAGATCGGCT ACCCGGTCGC GCTGGAGCGG ATCGCCCAGC AGTCGGGACA GCTTTTCTAC
TCCAAGTTCA TCATCGGCTT CGGCACCGCC GCCTACGCGG CGCACCAGAT CGGGCTCTCC
ATCGAATCTC TTTCCTTCAT GCCCGGGGCC GGCATGGGGA TCGCCGCCGC CACCTTGATG
GGACAGTCGC TGGGCGCCAA GAAACTCAGG CGCGCCCACA TGAGCCACAC CGAAGCGCTG
CGGCTCGCCA TCATCGTCAT GGCCTGCATG GCGCTCCTCT TTTTCTTCAT TCCGCACCAC
CTGATCGCCC TCTTCACCAG CGATCCCGAC GTCATCGAAA AAGGAAGCGT CTTCCTGAAG
CTGGTCGCCT TCGCCCAGGT GCCGCTCGCC ATCTCCTTCG TCTATGCCGG GAGCCTGCGC
GGTACCGGCG ACACGCATTA CGTCTTCCTG GTAACACTCG TCGCCATGTG GGGGATCAGG
GTGCTTCTCT CCTACGTCGC CGCAGTCCCG CTGCACCTCT CGCTCTACGC CGTCTGGGGG
GTGTTCCTGG TGGACTGGTT CTTCCGGGCC GGCGCTTTCT ATTGGCGCTA CCAGCGCCGC
GACCTGCACA GCGTCATCAT CTAG
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| Protein sequence | MKRLFIKRRR KPVSIRRNVA ALSMPVLLSS LFQRLVSIVD IFMVGGLGAA AIAATGLGQL
LIFVTMTVFW GLSTGANVVI AHLWGAGRQL EARRAGFASL LLCALLAVAA TLLGIGFGSE
VATFMGASSD VLAYASPYIR LVFLYFAFTA GLNILSAISQ GTGNTRTPME AILLVNILHV
VIAYPLIYGK FGFPRYGVIG AAYAINISEA AGFIYLLIQS LRKGYLKIGP PDMVLLNKVW
KIGYPVALER IAQQSGQLFY SKFIIGFGTA AYAAHQIGLS IESLSFMPGA GMGIAAATLM
GQSLGAKKLR RAHMSHTEAL RLAIIVMACM ALLFFFIPHH LIALFTSDPD VIEKGSVFLK
LVAFAQVPLA ISFVYAGSLR GTGDTHYVFL VTLVAMWGIR VLLSYVAAVP LHLSLYAVWG
VFLVDWFFRA GAFYWRYQRR DLHSVII
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