Gene Gbem_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3988 
Symbol 
ID6780852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4525715 
End bp4526944 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content58% 
IMG OID642769983 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_002140776 
Protein GI197120349 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGGG CTCCCGAGCA ATCGTTGCTA CCGCCGGTTC CCACGCAAAA GGAGATCGAG 
CGGAACGTCT TCCCGGTAGC CGGAGGTGAT GACGTGATCG GCACCTTGGC AGTGGTGAGG
CTTGAAAAGG GGGACACCCT GCCCGACATC GCCAGACACT TTAGCCTTGG GATCAACGCA
ATCAGCGCTG CCAACCCAGG TGTCGATGTA TGGGTCCCTG AACCGGGAAA GGAGGTCATC
CTCCCTTTGA GTTTCATCCT CCCGGATGCT CCCCGGAAAG GCATCGTGAT CAACTTGGCC
ACCATGCGGC TTTTCCGTTT CAAGGAAGAT GGTAAAGCGC AAGTGGTGTC GACCTACCCT
GTCGGTGTCG GCACCGCGGA GCGCCCGACG CCTACAGGCA AAATGCGCAT TGAACGCAAG
ACTGCCCTGC CCACTTGGCA CGTACCCGCT TCAATTGCCG AGGATCATAG GAAAAAAGGA
GATCTTCTCC CCGCGAAGGT TCCGCCGGGA CCTGAGAACC CTTTGGGTGA GCGCGCGCTT
TACCTGAGCA AAGCGGGGTA TCTGATTCAT GGCACCAACA AGCCGGCCAG CATAGGTCTT
AAGGCAACAA ACGGGTGCCT GCGGCTCTAC CCCGAGAATG TGACGACGCT TTACGAGGAG
ACGCCGGTCA ATACCCCGGT ACTCATCGTC AACCAGCCGT ATCTAGTGGG GCAACGGGAT
GGGGTCCTTT ATCTTGAGGC TCATGCGCCC CTGGAAAGCT CTGGTGCCCT GGAGTTGGAG
AAGGTGACGG CAAGACTGAG GAAGTGGGAA AAGAGGTACG GACGCTCACT TGACTGGGAA
AAAATCCGTA AAGTGCAAAC CGAGGCCAGA GGTGTCCCTG TCCCCATCTT GGCCTTTGGT
CAGGATAAGG CAAAAGATAG CCTGAAGACC GTTAACGTCG AGCGCCCGCT ACAAATGTTC
GGCGCGCCTG AGGTACCCGA GCTCAAACGG GATGCCTGGT ATGTTTTGGC TGCCAATGTG
GGCGGGGAGA TCGAGGCTCG GAGGCTGGCA GCCATTATCA ACCACCAGGG GCCGCCCATC
CCGGCACGGG TGCTGCCGCA AAGCAGCAAT AGCTACCATG TCATCGCCGG TCCTTTCGAT
AACGCCGGCT TGGCCAAAGA GGCGGTCAGG CGGCTGAAGC TCGACCTGGA ACTCGACGGC
ATAGTGATAG ACCCGGTCAA GAAGATATAG
 
Protein sequence
MQRAPEQSLL PPVPTQKEIE RNVFPVAGGD DVIGTLAVVR LEKGDTLPDI ARHFSLGINA 
ISAANPGVDV WVPEPGKEVI LPLSFILPDA PRKGIVINLA TMRLFRFKED GKAQVVSTYP
VGVGTAERPT PTGKMRIERK TALPTWHVPA SIAEDHRKKG DLLPAKVPPG PENPLGERAL
YLSKAGYLIH GTNKPASIGL KATNGCLRLY PENVTTLYEE TPVNTPVLIV NQPYLVGQRD
GVLYLEAHAP LESSGALELE KVTARLRKWE KRYGRSLDWE KIRKVQTEAR GVPVPILAFG
QDKAKDSLKT VNVERPLQMF GAPEVPELKR DAWYVLAANV GGEIEARRLA AIINHQGPPI
PARVLPQSSN SYHVIAGPFD NAGLAKEAVR RLKLDLELDG IVIDPVKKI