Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3964 |
Symbol | |
ID | 6780828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4500861 |
End bp | 4502270 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769959 |
Product | phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I |
Protein accession | YP_002140752 |
Protein GI | 197120325 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | [TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000701668 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCAGATCC AATTCGGCAC CGACGGTTGG CGCGGCGTGA TCGCGGACAC CTTTACCTTC GAGAACCTAT CCCTCGTGGC ACAGGCCACC ATGGATTACC TGCATGAGCA GGGAGTGGCG CAAAAGGGGC TGGTGATCGG ATACGACAGG CGCTTTTTGT CGCGGGAGTT CGCCGAAAGG GTAGCGGGGA TCGCAGCGGC AAACGGGATC GCGACCCGCC TCTCCGAAAG CTACGCCCCG ACTCCGGCCG TCTCCTGGGC GGTCCATGAA GGGGGGGCGG GCGCGGGGAT CATGATCACC GCCAGCCACA ACCCCCCCTG TTACAACGGT TTCAAGGTAA AGGAAGGCTT CGGCGGCTCG GCGAGGCCCA GCACCACGAA GGTTCTGGAG CAGATGGTGG CTCGCAACAT GGCGGAGAAG CGCCCGGTGC AGGCGGTAAC GCTGGCGGAG GGGCTGGAGT CGGGCAAGAT CGCATATTTC GATGCCTGCG CCCCCTATCT GGCGCAGCTG GCGCGGTACG TCGACTTGGA GCTGATCCGT TCCAGCGGCA TCAAGGCGGT GGTCGACCCG ATGTTTGGCG CGGGGTGCGG CCTTTTGCCG CGCCTGCTGC CCGGTGTCGT CGAGATTCAC GGCAGCGAGA ACCCTGCCTT TGGCGGCCAT CCTCCCGAGC CTATCGCCGA GCACCTGGGG GAGCTGTCGC AGGTGGTTGC CGACGGTTTC TTCCAGGTGG GACTCGCTCT CGATGGCGAC GCCGATCGTA TCGGCGCCGT TGACGAGCGG GGGAAATACT TTTCCTCGCA CCGGATCTTC ACCGTGCTGC TCCGTCACCT CTACGAGAGG AAGGGGTTGC GGGGAGGGGT GGTGAAGACG GTCTCGACCA CGCAGATGAT CGACCGGCTG GCCGAAAAGT ACGGCCTGCA GATCTTCGAG ACCCCGATCG GGTTCAAGCA CATCTGCGAG GTCATGCTGG AGCACGACAT TCTGATGGGT GGCGAAGAGT CGGGGGGGCT CGGGGTGAAA GGGCACATCC CGGAGCGTGA CGGCATCTTG ATGGCGCTCT TGCTTCTGGA GGCGATGGCC ATGAGCGGCA AGGGGCTGCG GGCTCTCCTT GAGGAGACCA TGGAGGAGAT AGGTCACTTC CATTACCGCC GCATCGACGT CCCCATCTCG GCGGCGGCGA AGCAGCAGCT CTTGGAGCGC CTGCGCGGCG ACGCCGTCGA CGTCATCGCC GGGCACCGTG TGGCGGCGAC CAATTTCAGC GACGGTTTCA AGTACATCCT GGAGGACGGG GCGTGGCTTT TGATCCGCCT TTCGGGAACA GAGCCGGTGC TGAGGCTGTA CAGCGAGGCG AGGGAACCGG ACCTGGTGGC CAGGCTCTTG GAGGCGGCAA AGCGGGTCGC AGGCGTGTAA
|
Protein sequence | MQIQFGTDGW RGVIADTFTF ENLSLVAQAT MDYLHEQGVA QKGLVIGYDR RFLSREFAER VAGIAAANGI ATRLSESYAP TPAVSWAVHE GGAGAGIMIT ASHNPPCYNG FKVKEGFGGS ARPSTTKVLE QMVARNMAEK RPVQAVTLAE GLESGKIAYF DACAPYLAQL ARYVDLELIR SSGIKAVVDP MFGAGCGLLP RLLPGVVEIH GSENPAFGGH PPEPIAEHLG ELSQVVADGF FQVGLALDGD ADRIGAVDER GKYFSSHRIF TVLLRHLYER KGLRGGVVKT VSTTQMIDRL AEKYGLQIFE TPIGFKHICE VMLEHDILMG GEESGGLGVK GHIPERDGIL MALLLLEAMA MSGKGLRALL EETMEEIGHF HYRRIDVPIS AAAKQQLLER LRGDAVDVIA GHRVAATNFS DGFKYILEDG AWLLIRLSGT EPVLRLYSEA REPDLVARLL EAAKRVAGV
|
| |