Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3961 |
Symbol | uvrC |
ID | 6780825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 4497671 |
End bp | 4499542 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769956 |
Product | excinuclease ABC subunit C |
Protein accession | YP_002140749 |
Protein GI | 197120322 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00581214 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACTC AGGCGATGAT CGAGAACTTC CCCCCCTCCC CCGGCGTCTA CCTCATGAAG AGCGCCGACG ACACCGTCAT CTACGTCGGC AAAGCGCGCA ACCTCAAGAA AAGGGTCCGC TCCTACGCGG GAGACACCCG CGACTCCCGG ATACACATCC GCTTCATGGT GCAACTGGTC CATTCGGTCG ACTACCTGGT CACCGACACG GAGAAGGAAG CGCTCATCCT CGAAAACACG CTGATCAAGC AGCACCGCCC CAAGTACAAC ATCAACCTGC GCGACGACAA GACCTACTTC TCGCTGCGCA TGGACATGAA GGAACAGTTC CCGCGCCTCT CCATCGTCCG GAAGATCCCC TCCGATGGCG CTCGCTACTT CGGCCCCTAC GCCTCTGCCA CCGCCGCCAA AGAGGTGCTG AAACAGCTCT ACAAGATGTT CCCGCTGCGC CACTACCCCC TTGCCACCTG CATGGCCAGA AAGCGCCCCT GCCTGTACCA CCAGATCAAG CAGTGCTCCG CACCTTGCTG CGGCCTCATC TCCGCCGCGG AGTATGCGGC GCTGGCCCAT GGGGCCGCAC TCTTCCTGGA GGGGAAGAAC ACCGAGGTGG CGCGGCTCTA CCGGTCCAAG ATGAACCTGG CCGCCGAGCA GATGCGCTAC GAGGACGCGG CCCGCTACCG GGACCTGCTG CGCGCCATCG AGGTGACGGT CGAGCGGCAG AAGATGGTGG CACAAAGCGA CGACAGCGAC GTTTTCGGCT TGCACCGCGA GGCGGACCGG ATGCAGATCG CCCTTTTGCA CATCCGCGGC GGGACCCTGA CCGGCGGGCG CAGCTTCCTC TTCGACTGGG AACTGGAGAC CGAGGAGGGA CTCGCCTCCT TCCTGAACGA GTACTACGAC CTGGACGCGC CTATCCCCCC CCAGGTGCTG ATACCGGTTC CCATAGCCGA GCCCGCCGCG CTGGAGGAGC TTCTTTCCGA AAAAGCAGGG AAGAAGGTGA CCATCGCAGT GCCGCAGCGC GGCCCGAAAC TCGAGATGGT GAAACTTGCC GGGAAGAACG CCGAGACCGC TGCCCAGGAA CGCTTGGCGC GGGAGAGTTC CTCCGCGACG CTTCTGACCG AACTGGCCGA GAAACTGAAC CTGCCGCACC CCCCGAGAAG GATCGAGTGC TACGACATCT CCAACATCCA AGGGGAGATG GCGGTCGGGA GCCGGGTGGT CTTCATCGAC GGCAGGGCCG ACAAGTCCCT GTACCGGCGC TACCGGATCA AAGGGGTGCT GCAGTCGGAC GACTTCGCCA TGATGCGCGA GGTGCTCTCG CGCAGGTTCA AGGCCGAAAG CAGCGAAGAG AAGCCGGACC TGATCGTGGT CGACGGGGGT CTCGGGCAGC TGGGCGTCTT GAACGCGGTG CTCGACGAGC TTGAGGTCAC CGGGGTCGAG GCTGCGGGGC TCGCCAAAAG CCGCGTGGCC CGCGACATGG AGAGCGAAGA GATCGAGCGC AGCGACGAGC GCGTGTTCCG CCCCGGCCGG AAGAATGCGA TTGCCCTCAG GCAGAGTTCC GCCCCGCTAC TGCTCCTGGT GCGCATCAGA GACGAGGCGC ACCGCTTCGC CGTCACCTAC CACAAGGACG TGCGCAGCAA GGTCCTGACC GGTTCCGAGC TGGACGGAGT CGCGGGTATC GGCGAGAAGA GGAAGAAGGC GCTGTTGAAG CATTTCGGGA GTCTAAAACG GGTGAAAGAG GCGACGCTGG AAGAGCTGAA GGGCGCGCCG GGGATGACCG AAAGTGCGGC GAAGGCGTTG GTGGAACGTC TGCATGGCAG CCCCCTCCCC AACCCTCCCC CTCCTGGGGA GGGAGCCATG GACCGCAAAT AA
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Protein sequence | MITQAMIENF PPSPGVYLMK SADDTVIYVG KARNLKKRVR SYAGDTRDSR IHIRFMVQLV HSVDYLVTDT EKEALILENT LIKQHRPKYN INLRDDKTYF SLRMDMKEQF PRLSIVRKIP SDGARYFGPY ASATAAKEVL KQLYKMFPLR HYPLATCMAR KRPCLYHQIK QCSAPCCGLI SAAEYAALAH GAALFLEGKN TEVARLYRSK MNLAAEQMRY EDAARYRDLL RAIEVTVERQ KMVAQSDDSD VFGLHREADR MQIALLHIRG GTLTGGRSFL FDWELETEEG LASFLNEYYD LDAPIPPQVL IPVPIAEPAA LEELLSEKAG KKVTIAVPQR GPKLEMVKLA GKNAETAAQE RLARESSSAT LLTELAEKLN LPHPPRRIEC YDISNIQGEM AVGSRVVFID GRADKSLYRR YRIKGVLQSD DFAMMREVLS RRFKAESSEE KPDLIVVDGG LGQLGVLNAV LDELEVTGVE AAGLAKSRVA RDMESEEIER SDERVFRPGR KNAIALRQSS APLLLLVRIR DEAHRFAVTY HKDVRSKVLT GSELDGVAGI GEKRKKALLK HFGSLKRVKE ATLEELKGAP GMTESAAKAL VERLHGSPLP NPPPPGEGAM DRK
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