Gene Gbem_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3956 
Symbol 
ID6780820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4493089 
End bp4493928 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content64% 
IMG OID642769951 
ProductparB-like partition protein 
Protein accessionYP_002140744 
Protein GI197120317 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.109867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAAGA AGATGGGGCT CGGCAAGGGG ATGGGGGCGC TGCTCCCGGT CGTGGAGGAC 
CACGGCAAGA AGTACTTCTC CTGCCCGATC GAGGAGATCA GGCCCAACAA GGAACAGCCG
AGAAAGACCT TCGTCAATGA GAAGCTGGAG GAACTCGCCG CTTCCATCCG CGAGAAGGGG
ATCATCCAGC CCCTGGTGGT GCTCAAGAAG GCCGGGCACT ACGAGCTGAT CGCCGGCGAG
CGCCGCTGGC GCGCCGCGCA AAAGGCGGGG CTGCGCGAGG TTCCGGTGGT GATCCAGGAC
GTTTCCGAGG AAACGGCCCT GGAAATGGCG CTCATCGAGA ACATCCAGCG CGAGGACCTG
AACGCGGTCG AGGAGGCCGA GGCATACCAT GCGCTTTTGG AGCGCTTCTC CCTCTCGCAG
GAGGAGCTGG CCAAGAGGGT CGGCAAGGAG CGCTCGACCA TTGCCAATGC CCTGAGGCTT
TTGAGGCTTC CCGCCGAGAT CAAGCGCGAC GTGGCTGAAG ACCGCATCTC CATGGGGCAC
GCCCGCGCGC TCCTCACCCT GGAAGACCCG GAGGAGCAGA AGGCGGCCCG CGACGAGATC
GTGAAGAACC ACCTCTCGGT GCGCGAGACC GAGGCGCTGG TCAAGCGCAA GAAGGCGGGC
CCGGCGAAAA AGCCCCAGAA GCCTGTCGAG AGCCCGGACC AGAAGGACCT CATGGACCGG
ATGCAGCGCT TCTTCGGAGC CAAGGTCGCC CTGAAGAGTT CCGGGCGCGG CGGCAAGCTG
GAGATAAGCT ACGCGGACCA GAAGGAACTC GCCAGGATCG TGGAACTCCT GAACCTGTAG
 
Protein sequence
MVKKMGLGKG MGALLPVVED HGKKYFSCPI EEIRPNKEQP RKTFVNEKLE ELAASIREKG 
IIQPLVVLKK AGHYELIAGE RRWRAAQKAG LREVPVVIQD VSEETALEMA LIENIQREDL
NAVEEAEAYH ALLERFSLSQ EELAKRVGKE RSTIANALRL LRLPAEIKRD VAEDRISMGH
ARALLTLEDP EEQKAARDEI VKNHLSVRET EALVKRKKAG PAKKPQKPVE SPDQKDLMDR
MQRFFGAKVA LKSSGRGGKL EISYADQKEL ARIVELLNL