Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3950 |
Symbol | |
ID | 6780814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4487280 |
End bp | 4488692 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642769945 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_002140738 |
Protein GI | 197120311 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.45912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGA ACTTCGGAAA AATATCGCAG GTCATCGGCG CAGTTATCGA CGTCGAATTC GAGCCGGGCA AGCTTCCCCC GATCTATCAA GCTCTCAGGG TCACCAACCC TGCGATCGAC GATCAGGAGT TCAACCTTGT TCTGGAAGTC GCACAGCACC TGGGCGAGAA CGCGGTCAGG ACCATCGCAA TGGACTCCAC CGACGGTCTG GTTCGTGGCC AGCAGGTCAA AGACATGGGC AAGCAGATCT CGGTACCGGT CGGCAAGAAG ACACTGGGCC GCATCCTGAA CGTCATCGGC GAGCCGGTTG ACGAGATGGG CCCGATCGGC AACGAGAAAG AGTACGGCAT CCACCGCGAA GCCCCGCTCT TCGTGAACCA GTCGACCAAG GTCGAGGCGT TCACCACCGG GATCAAGGTC GTCGACCTCC TCGCACCGTA CGCAAGGGGG GGCAAGATCG GCCTCTTCGG CGGCGCAGGC GTTGGCAAGA CCGTTCTCAT CATGGAGCTG ATCAACAACA TCGCTAAGCA GCACGGCGGC TTCTCCGTCT TCGCCGGCGT CGGCGAGCGT ACCCGCGAAG GGAACGACCT CTGGATGGAG ATGAAGGAAT CCGGCGTTCT CGACAAGGCG GCACTCGTGT ACGGCCAGAT GAACGAGCCC CCGGGGGCAC GTGCCCGCGT CGCTCTCTCC GCGCTCTCCA TCGCAGAGTA CTTCCGCGAC GAGGAAGGCC AGGACGTGCT CCTCTTCGTC GACAACATCT TCCGCTTCAC CCAGGCGGGT TCCGAGGTTT CCGCACTCCT CGGCCGTATC CCCTCCGCCG TCGGTTACCA GCCGACCCTG GCAACCGAGA TGGGCGAGCT GCAGGAGCGC ATCACCTCGA CCAACAAGGG TTCCATCACC TCGGTCCAGG CGATCTACGT TCCGGCCGAC GACTTGACCG ACCCGGCTCC GGCTACCGCC TTCGCCCACT TGGACGCGAC CACCGTTCTC TCCCGTCAGA TCGCCGAGCT CGGCATCTAC CCGGCAGTGG ACCCGCTCGA CTCCACCTCC AGGATCCTCG ATCCGCAGGT AATCGGCGAC GAGCACTACG CCATCGCGCG TCAGGTTCAG TACGTGCTGC AGAAGTACAA GGATCTCCAG GACATCATCG CGATTCTCGG CATGGACGAG CTCTCCGAGG AGGACAAACT GGTTGTTGCC CGCGCCAGGA AGATCCAGAA GTTCCTCTCC CAGCCGTTCC ACGTCGCGGA AGCCTTCACC GGCTCCCCGG GCAAATACGT CGAACTGAAG GACACCATCA AAGGCTTCTC CGAGATCATC GCCGGCAAGC ACGACGACCT CCCCGAGCAG GCCTTCTACA TGGTCGGCAC CATCGAGGAA GCTATCGAGA AGGCCCAGAA GCTCGCGGTG TAA
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Protein sequence | MSQNFGKISQ VIGAVIDVEF EPGKLPPIYQ ALRVTNPAID DQEFNLVLEV AQHLGENAVR TIAMDSTDGL VRGQQVKDMG KQISVPVGKK TLGRILNVIG EPVDEMGPIG NEKEYGIHRE APLFVNQSTK VEAFTTGIKV VDLLAPYARG GKIGLFGGAG VGKTVLIMEL INNIAKQHGG FSVFAGVGER TREGNDLWME MKESGVLDKA ALVYGQMNEP PGARARVALS ALSIAEYFRD EEGQDVLLFV DNIFRFTQAG SEVSALLGRI PSAVGYQPTL ATEMGELQER ITSTNKGSIT SVQAIYVPAD DLTDPAPATA FAHLDATTVL SRQIAELGIY PAVDPLDSTS RILDPQVIGD EHYAIARQVQ YVLQKYKDLQ DIIAILGMDE LSEEDKLVVA RARKIQKFLS QPFHVAEAFT GSPGKYVELK DTIKGFSEII AGKHDDLPEQ AFYMVGTIEE AIEKAQKLAV
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