Gene Gbem_3949 details

Gene Information

• Locus tag: Gbem_3949
• Symbol: atpC
• ID: 6780813
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 4486766
• End bp: 4487182
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642769944
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_002140737
• Protein GI: 197120310
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAAA AACTGAAGGT TGAACTGGTA ACCCCGTACA AGAAGGTCCT CTCCGAAGAG 
GTCGACGAGA TCACCGCTAC CGGTGCCCTC GGAGAATTCG GCGTTCTGCC GGGCCACGCT 
CCCTTCCTCA CCTCGCTGAA GATCGGCGAG CTGGCCTACA GGAAGGACGG CGTGTCGCAC 
CACATGGCGC TGAACTGGGG CTACTTCGAG GTCGAGAACG ACACCGTGAC GGTGCTGGTC 
GAGACCGCCG AGAAGGCGGA CGAGATCGAC CTGGAGCGCG CCAAGGCGGC CCTGGGCCGC 
GCCGAGACCG AACTCAAGGG CCTGACCCCG GAGGACAAGA ACTTCCGGAT CTACGAAGCC 
GCGCTCGAGC GTGCGCTGAT CAGGGTCCAG GTCGCCGGCA AGGCGGCCAG ACGCTAA 

 

Protein sequence

MAEKLKVELV TPYKKVLSEE VDEITATGAL GEFGVLPGHA PFLTSLKIGE LAYRKDGVSH 
HMALNWGYFE VENDTVTVLV ETAEKADEID LERAKAALGR AETELKGLTP EDKNFRIYEA 
ALERALIRVQ VAGKAARR