Gene Gbem_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3914 
Symbol 
ID6780778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4451236 
End bp4452843 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content59% 
IMG OID642769909 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_002140702 
Protein GI197120275 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0719914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGC TACCGTTACT GAGCATATTA ACCTTCACAC CGCTGATCGG GGCGATTCTC 
CTCCTCTTTG TGAACAAGAA CAGCCACGGC GTGCTCCGTA CCGTTGCCAT GGCGGTGACG
GTGGTGACGT TCGTCCTCTC GCTGCCTCTG ATCACGGGGT ACAACGCGCC TGGGACCGAC
ATCGGCGGCT TCCAGTTCAT CGAGAACGTG CCCTGGATCG CAGCCGGCCC CTTCCAGATG
AGCTACCATC TGGGCATCGA CGGCATCAGC CTCTGGCTCG TCATCCTCAC CACCTTCATC
ATGCCGATCT CCATCCTTTC CACCTACACG GCGGTTGAAG AGAAGGTGAA GGAGTACATG
ATCTGCCTCC TGCTGCTCGA AGTAGGCATG ATCGGAACCT TTATCTCGCT CGACCTCTTC
CTCTTCTACA TCTACTGGGA AGTGATGCTG ATCCCGATGT ACTTCATGAT CGGTATCTGG
GGCGGCAAGA ACAGGATTTA CGCTGCAGTC AAGTTCTTCA TCTACACCGC GGTCGGTTCG
CTCCTCATGC TGGTCGCATT GATCTCCCTT TACTTCAAGG CGGGCGGCGG CGACTTCAGC
ATCATCCGCT TCTGGGAATT GAACCTCGAC CCGACCACCC AGATGTGGAT GTTCCTGGCC
TTCGCACTGG CCTTCGCCAT CAAGGTCCCG ATGTTCCCGC TGCACACCTG GTTGCCTGAC
GCACATACCG AGGCGCCGAC CGCAGGCTCC GTCATCCTGG CCGCCGTCAT GCTGAAATGC
GGTACCTACG GTTACGTCCG CTTCGCCATG CCGCTCTTCC CGGAAGCAAG CGCGCAGTTC
ACCCCGCTCA TCGCAACCCT GTCCGTCATC GGCATCATCT ACGCATCGCT GGTCGCGATG
GTGCAGCAGG ACGTCAAGAA GCTGGTCGCC TACTCTTCCG TAGCGCACCT GGGCTTCGTC
ATGCTCGGCC TCTACGCCCT CAACACCCAG GGTGTCACCG GCGGCATGCT GCAGATGCTC
AACCACGGCG TTTCCACCGG CGCATTGTTC CTTATCGTCG GATTCATCTA CGAGCGCCGT
CATACTCGTC AGATCTCCGA CTTCGGCGGC CTCGCCAAGC AGATGCCGGT TTTCGCCACC
ATGTTCATGA TCGTCACCTT CTCCTCCATC GGCCTTCCGG GGACCAACGG CTTCGTCGGC
GAATTCCTGG TGCTCCTGGG CTCCTTCGAG AGCAGCCTCC GCTGGTATGC GATCATCGCC
ACCTCCGGCG TCATCCTTTC CGCCGTCTAC ATGCTCTGGA TGTTCCAGAG GGTCATGTTC
GGCGAACTGA AGAACCCGAA AAACCAGACT CTGAAGGACC TGAACGCAAG GGAAGTAGCA
ATCATGCTTC CGCTTCTCTT CCTCATCTTC TTCCTGGGCG TCTACCCGCG CCCCATCATT
GACTCCATGG CTCCGTCGAT CGATAAACTG ATCGCGCACA CCAAGGTGCA GAAGCAGGTG
GCACAAGTAG CAGCACCGGC CGCGCCGCAG CTTCCGGCAG GGCACGTAGC AGTTCCGGGC
CTTCCCGAAG AGCATCCGGC TCTCCCCGCA ACCCAAGAAG TAAAATAG
 
Protein sequence
MNQLPLLSIL TFTPLIGAIL LLFVNKNSHG VLRTVAMAVT VVTFVLSLPL ITGYNAPGTD 
IGGFQFIENV PWIAAGPFQM SYHLGIDGIS LWLVILTTFI MPISILSTYT AVEEKVKEYM
ICLLLLEVGM IGTFISLDLF LFYIYWEVML IPMYFMIGIW GGKNRIYAAV KFFIYTAVGS
LLMLVALISL YFKAGGGDFS IIRFWELNLD PTTQMWMFLA FALAFAIKVP MFPLHTWLPD
AHTEAPTAGS VILAAVMLKC GTYGYVRFAM PLFPEASAQF TPLIATLSVI GIIYASLVAM
VQQDVKKLVA YSSVAHLGFV MLGLYALNTQ GVTGGMLQML NHGVSTGALF LIVGFIYERR
HTRQISDFGG LAKQMPVFAT MFMIVTFSSI GLPGTNGFVG EFLVLLGSFE SSLRWYAIIA
TSGVILSAVY MLWMFQRVMF GELKNPKNQT LKDLNAREVA IMLPLLFLIF FLGVYPRPII
DSMAPSIDKL IAHTKVQKQV AQVAAPAAPQ LPAGHVAVPG LPEEHPALPA TQEVK