Gene Gbem_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3896 
Symbol 
ID6780760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp4432792 
End bp4433391 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content58% 
IMG OID642769891 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002140684 
Protein GI197120257 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.971829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA CGGAATGTCA CAAGAAGCTT ATGGAGGTGG GAACGCAGCT GTTCTCGGAG 
AGGGGGCTAA AGGGGGTAAG CATCCGGGAG CTCTCGCTCG CGGCGGGGAC CAGCATCTCA 
ATGATCTCCT ACCATTTCGG CAGCAAGGAA GGGCTCTATC AGGCGGTGTT GCAGCAGCAG 
TTCGCCTGTT TCAAGGAAAT CCATGAGATC AGGCAGCGCG TGACGGACCC GGTGGAGATG 
GTAAAGAGCT ATCTGCTCTG GACCTTCGGG CGCCACAGAA ACAACCCGTA CCTGCTCCGC 
TTTTACACGA GCGAGTTGAC CAACCCGACG GCGTTTTTCG AGCCCTTGGT GATGCCGGTA 
ATCGACGAGG TCATCGTGAC CATGGCGGGG GCGATCGAGG AGGGGATCCG GCAGAAGAAG 
TTCCGGGAGG ATGTCGATCC CACCAACGCG GCACTGGCGC TGGCGGGGAT GGTGAATTAC 
TTCTTCCTGA GCAGCCTGGC GACCAGGAAC CTGATCAGCC ATTCCCCCGA AAAGGACGAA 
ATGCTGGTGC AGCAGTACCT GGACATCTTC ACGCGGGGAA TCGGCGCCTC AAGCGGATGA
 
Protein sequence
MEKTECHKKL MEVGTQLFSE RGLKGVSIRE LSLAAGTSIS MISYHFGSKE GLYQAVLQQQ 
FACFKEIHEI RQRVTDPVEM VKSYLLWTFG RHRNNPYLLR FYTSELTNPT AFFEPLVMPV 
IDEVIVTMAG AIEEGIRQKK FREDVDPTNA ALALAGMVNY FFLSSLATRN LISHSPEKDE 
MLVQQYLDIF TRGIGASSG