Gene Gbem_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3853 
Symbol 
ID6780717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4391667 
End bp4393010 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content66% 
IMG OID642769848 
Productouter membrane efflux protein 
Protein accessionYP_002140641 
Protein GI197120214 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCGAA AGATAATGCC GCTGATCGTA ATGTACTTCG CACTCCTCGC GGCGCCGGCC 
TTGGGGGAGA CGGTCACCCT GCGCGAGGCG GTGCACCGGG CCCTCGAGAG CAACAACCTG
CTGAAGGCGG CGTCGTTCCA GCGGGGCGCG GCGGAGCAGG AGGTCGCGGT CAGCAAGAGC
CGCTACCTTC CCCGCGTTCA GGCCGAAAGC GGCGTGGTTC TTTCCAATAC CCCATCGAGC
GTCTTCATGA TGAAGCTGGA CGAGGGGCGC ATCAACCCTT CCGGCGACTT TGCCGCCGAC
ACCCTCAACA ACCCGTCGCC GCGCGCGGAT TTCCGCACCT CGGTCTCGCT TGAGCAGCCG
CTTTTCGATC TCGGGATCGG GAACGGCGTG CGCATGGCGG ACAAGAACGC CCAGGCGGCA
GATCTCTCCC TCCAGGGGAG GCGCGAGGAG GTTGCCTTCC GCGTCTACCT GGCCTATCTC
GGGGTGCGGC GCGCCCAGGC CTACTGCAGC ATCGCAGACC AGGCGCTGGC CAACGCGAAG
GAGCATGATC GCCTGGCCGG GTTGCGGGAA AAGGACGGCC TGGGGCTTAA ATCCGACCGG
CTGCGCACCG CGACCGCGCT ATCCGAGGCG GAGCAGCGGC TGGTATCGGC GCAAAACGAC
CTGTTGCTGT CACGCATGAG GCTGAACCTG GCGGCCGGCG GCGAGCAGGG GGGAGCGTTG
GATATAGGCG AACTCCCCGA GATAAAGGAA CCGGCACTGC CCCAGCAGGA CCTGGTGGCG
CTGGCCCAGC AAAGCCGCCC GGACCTGAAA GCGGACGAGA CCTCGGTGCA ACTGGGGGAA
CTCGCGGTAC GACAGGCAAG GGACGCCTAC TTCCCCACCG TTTATGCCCG GGGGGCTTAC
CAGATAAACG ACCGCGACCT CCCGCTGGGG ATGGACAAGG ATTCATGGAA CCTGGGGGTG
AATCTGCGTT GGGAGCTCTT CGACGGCGCC AGGCGCTCCC ATGAGAAGAC GAAAGCCGAG
CTTAGCCGCA AGGCTGCGGC GGCGGTGCTG GAAAACGACC GCAGAGAAGT GGCGCTCCAG
GTGACCGAGA GCGTGCTCAG GCGCCAGGAG GCTCTGCTCA GGTTGGAGAG CGCACGGCGG
GCGGTGCAGG ACGCCGAGGA AGGTGTGCGC CTGGTGGCGC TCCGCTTTGG CAACGGGCTC
TCCCCGCTGG TAGAGCTGAT GGATGCCGAA GCGGCGTTGA ACCGGTCCCG GGCCAGCCTG
GTCGAGGTGG AGAACAACCT CCTCGCCTCA ACCGGCGAGG TCTATTTCCG TGCGGGGGTA
TTTCTGAAGG AGGTCATCCA ATGA
 
Protein sequence
MSRKIMPLIV MYFALLAAPA LGETVTLREA VHRALESNNL LKAASFQRGA AEQEVAVSKS 
RYLPRVQAES GVVLSNTPSS VFMMKLDEGR INPSGDFAAD TLNNPSPRAD FRTSVSLEQP
LFDLGIGNGV RMADKNAQAA DLSLQGRREE VAFRVYLAYL GVRRAQAYCS IADQALANAK
EHDRLAGLRE KDGLGLKSDR LRTATALSEA EQRLVSAQND LLLSRMRLNL AAGGEQGGAL
DIGELPEIKE PALPQQDLVA LAQQSRPDLK ADETSVQLGE LAVRQARDAY FPTVYARGAY
QINDRDLPLG MDKDSWNLGV NLRWELFDGA RRSHEKTKAE LSRKAAAAVL ENDRREVALQ
VTESVLRRQE ALLRLESARR AVQDAEEGVR LVALRFGNGL SPLVELMDAE AALNRSRASL
VEVENNLLAS TGEVYFRAGV FLKEVIQ