Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3853 |
Symbol | |
ID | 6780717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4391667 |
End bp | 4393010 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642769848 |
Product | outer membrane efflux protein |
Protein accession | YP_002140641 |
Protein GI | 197120214 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCGAA AGATAATGCC GCTGATCGTA ATGTACTTCG CACTCCTCGC GGCGCCGGCC TTGGGGGAGA CGGTCACCCT GCGCGAGGCG GTGCACCGGG CCCTCGAGAG CAACAACCTG CTGAAGGCGG CGTCGTTCCA GCGGGGCGCG GCGGAGCAGG AGGTCGCGGT CAGCAAGAGC CGCTACCTTC CCCGCGTTCA GGCCGAAAGC GGCGTGGTTC TTTCCAATAC CCCATCGAGC GTCTTCATGA TGAAGCTGGA CGAGGGGCGC ATCAACCCTT CCGGCGACTT TGCCGCCGAC ACCCTCAACA ACCCGTCGCC GCGCGCGGAT TTCCGCACCT CGGTCTCGCT TGAGCAGCCG CTTTTCGATC TCGGGATCGG GAACGGCGTG CGCATGGCGG ACAAGAACGC CCAGGCGGCA GATCTCTCCC TCCAGGGGAG GCGCGAGGAG GTTGCCTTCC GCGTCTACCT GGCCTATCTC GGGGTGCGGC GCGCCCAGGC CTACTGCAGC ATCGCAGACC AGGCGCTGGC CAACGCGAAG GAGCATGATC GCCTGGCCGG GTTGCGGGAA AAGGACGGCC TGGGGCTTAA ATCCGACCGG CTGCGCACCG CGACCGCGCT ATCCGAGGCG GAGCAGCGGC TGGTATCGGC GCAAAACGAC CTGTTGCTGT CACGCATGAG GCTGAACCTG GCGGCCGGCG GCGAGCAGGG GGGAGCGTTG GATATAGGCG AACTCCCCGA GATAAAGGAA CCGGCACTGC CCCAGCAGGA CCTGGTGGCG CTGGCCCAGC AAAGCCGCCC GGACCTGAAA GCGGACGAGA CCTCGGTGCA ACTGGGGGAA CTCGCGGTAC GACAGGCAAG GGACGCCTAC TTCCCCACCG TTTATGCCCG GGGGGCTTAC CAGATAAACG ACCGCGACCT CCCGCTGGGG ATGGACAAGG ATTCATGGAA CCTGGGGGTG AATCTGCGTT GGGAGCTCTT CGACGGCGCC AGGCGCTCCC ATGAGAAGAC GAAAGCCGAG CTTAGCCGCA AGGCTGCGGC GGCGGTGCTG GAAAACGACC GCAGAGAAGT GGCGCTCCAG GTGACCGAGA GCGTGCTCAG GCGCCAGGAG GCTCTGCTCA GGTTGGAGAG CGCACGGCGG GCGGTGCAGG ACGCCGAGGA AGGTGTGCGC CTGGTGGCGC TCCGCTTTGG CAACGGGCTC TCCCCGCTGG TAGAGCTGAT GGATGCCGAA GCGGCGTTGA ACCGGTCCCG GGCCAGCCTG GTCGAGGTGG AGAACAACCT CCTCGCCTCA ACCGGCGAGG TCTATTTCCG TGCGGGGGTA TTTCTGAAGG AGGTCATCCA ATGA
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Protein sequence | MSRKIMPLIV MYFALLAAPA LGETVTLREA VHRALESNNL LKAASFQRGA AEQEVAVSKS RYLPRVQAES GVVLSNTPSS VFMMKLDEGR INPSGDFAAD TLNNPSPRAD FRTSVSLEQP LFDLGIGNGV RMADKNAQAA DLSLQGRREE VAFRVYLAYL GVRRAQAYCS IADQALANAK EHDRLAGLRE KDGLGLKSDR LRTATALSEA EQRLVSAQND LLLSRMRLNL AAGGEQGGAL DIGELPEIKE PALPQQDLVA LAQQSRPDLK ADETSVQLGE LAVRQARDAY FPTVYARGAY QINDRDLPLG MDKDSWNLGV NLRWELFDGA RRSHEKTKAE LSRKAAAAVL ENDRREVALQ VTESVLRRQE ALLRLESARR AVQDAEEGVR LVALRFGNGL SPLVELMDAE AALNRSRASL VEVENNLLAS TGEVYFRAGV FLKEVIQ
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