Gene Gbem_3813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3813 
SymbolcobT 
ID6780677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4353083 
End bp4354135 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content65% 
IMG OID642769808 
Productnicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_002140601 
Protein GI197120174 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.481208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTC TGGAATCGGC GCTGGCAAAA ATCCAGCCGG TAGACGAGGC GCTTTTGACC 
GAGGCGCAGG CAAAGCTGGA CAACAAGACC AAGCCGCCGG GGTCCCTCGG GCTCCTGGAG
GAGATGGCGC GCCGCTTCGC CGCCATCACC GGCGACCTTT CCCCCAAGAT GGGGAAGAAG
GTCATCTTCA CCTTTGCCGG CGACCACGGC ATCGTGGAGG AGGGGGTCTC CCTCTTTCCT
AAGGAAGTGA CCCCGCAGAT GGTGCTCAAC TTCCTGCGCG GCGGCGCGGG GGTCAACGTG
CTCGCCCGCC ACGCAGGCGC CGAGGTGCGG GTGGTCGACG TCGGGGTCGA TTACGATTTC
GAGCCGACCG AGGGACTCAT CATCAGGAAG ATCGCCAAGG GTACCCGCAA CTTCGCTAAG
GAAAGCGCCA TGACGCGCGA GGAGGCGGTG GCCGCCATCG AGGTGGGGAT TGCGCTGGCG
GACCGGGCCA AGGCCGAGGG TATCTCCATG GTCGGTACCG GCGAGATGGG GATTGGCAAC
ACCAGCCCCT CCTCCGCCAT CATCGCGGCC TTCGCCGGCT GCAGCGTGCG CGAGGTGACA
CATCGCGGTA CCGGCATCGG CGATCAGGCG CTGGAGCATA AGATCAAAGT GATCCAGGCC
GGTCTCGACC TGAATCGTCC CAACCCGGAA GACCCCCTGG ACGTGCTCTC CAAGGTGGGG
GGGCTGGAGA TCGCTGGCAT CGCCGGGCTG GTCCTGGGTG CCGCCGCTAA CCGGATCCCG
GTCGTCGTGG ACGGCTTTAT CTCCACCGCG GGGGCGCTTA TCGCCTGCGA GATGCACCCG
AACGTCAGGG AGTACATCTT CGCCGCCCAC AACTCGGTCG AGATCGGCCA CCAGATGATG
CTGCAGCGGA TCGGCGCCAA GCCGATACTC GACCTGCAAC TGCGCCTCGG CGAGGGGACC
GGCGCCGCTT TGGCCATGGG TCTCATCGAG GCAGGCGTCA AGGTCCTCAA CGAAATGGCG
ACCTTCGAAG AGGCCGGAGT GGCCTCCTCC TAG
 
Protein sequence
MELLESALAK IQPVDEALLT EAQAKLDNKT KPPGSLGLLE EMARRFAAIT GDLSPKMGKK 
VIFTFAGDHG IVEEGVSLFP KEVTPQMVLN FLRGGAGVNV LARHAGAEVR VVDVGVDYDF
EPTEGLIIRK IAKGTRNFAK ESAMTREEAV AAIEVGIALA DRAKAEGISM VGTGEMGIGN
TSPSSAIIAA FAGCSVREVT HRGTGIGDQA LEHKIKVIQA GLDLNRPNPE DPLDVLSKVG
GLEIAGIAGL VLGAAANRIP VVVDGFISTA GALIACEMHP NVREYIFAAH NSVEIGHQMM
LQRIGAKPIL DLQLRLGEGT GAALAMGLIE AGVKVLNEMA TFEEAGVASS