Gene Gbem_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3797 
SymbolispD 
ID6780661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4336254 
End bp4336949 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID642769792 
Product2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 
Protein accessionYP_002140585 
Protein GI197120158 
COG category[I] Lipid transport and metabolism 
COG ID[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.141467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCAGGA TTTACGCGCT GATACCTGCC GCCGGAATGG GCAAAAGGAT GGGTGCCGGC 
TCCAACAAGC AGTACCTGCT GCTGGACGGC ATGCCGATTC TCGCCCGCAC CGTCGCAGCC
TTCGAGGCGG CCCCCTTCAT AGACGGGATC TACCTCGTTT CGCCGGAGCA GGAGATCCCG
TTTTGCCGCA GCGAGGTGGT CGACCATTAC GGTTTTTCCA AGGTGCGCGC CATCGTCCCC
GGCGGGGCCG AGCGGCAGCA CTCGGTCTGC AACGGGCTGG ACGCCATGGC TGACGCTGCT
GACGACGACC TGGTGCTGAT CCACGACGGG GTGCGCCCTT TCGTTTCGCA AGAGATGCTG
GAAGCCGCCG CTGACGCCGC CAGGGAACAT GGCGCATCCG TGGTCGCGGT CCCGGTGAAG
GACACGGTGA AGGTGGTGAA AGGCGGCGTC ATCTCCGAAA CCCCGCCTCG CGAAGAGCTC
TGGTTGGCGC AAACGCCGCA GGCTTTCCGC TATGGCCTGA TCCGCGATGC CCACGCGCGT
GCAAAGGCGG AAGGGTATCT GGGGACCGAC GATGCGTCCC TCGTCGAGCA TCAGGGGGGA
GAGGTGCGCA TCGTCACGGG CGACTACCGC AACATCAAGA TCACGACGCC CGAGGACCTG
GTCCTTGCCG AGGCGTTTTT GAAAGGAAAG GGATGA
 
Protein sequence
MSRIYALIPA AGMGKRMGAG SNKQYLLLDG MPILARTVAA FEAAPFIDGI YLVSPEQEIP 
FCRSEVVDHY GFSKVRAIVP GGAERQHSVC NGLDAMADAA DDDLVLIHDG VRPFVSQEML
EAAADAAREH GASVVAVPVK DTVKVVKGGV ISETPPREEL WLAQTPQAFR YGLIRDAHAR
AKAEGYLGTD DASLVEHQGG EVRIVTGDYR NIKITTPEDL VLAEAFLKGK G