Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3741 |
Symbol | |
ID | 6780605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 4272667 |
End bp | 4275987 |
Gene Length | 3321 bp |
Protein Length | 1106 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642769736 |
Product | TPR repeat-containing protein |
Protein accession | YP_002140529 |
Protein GI | 197120102 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGCGC CCGAGAGCGC ACGCGAGCTT TTCCTGGCGG GGAACGCGCT TTTCGGCGCG GGGGACCTCT CCGGCGCGTC GGAGTGCTAC CGGCGCGCCC TGCAGCTCGA TCCCGGCTAC GCCGAGGCGT GCTTCAACCT GGGGTGCACC CTGGACCGCC TGTCCGGCCC CGCCGAGGCG CTGCCCCACT TAGCGCGCGC CGTCGAGCTG TCGCCTGAGT GGAGCCGGGC CCGCGGCAGC CTGGGTTTCG CCCTGGCCCG TCTCGGCCGC ATGGGGGAGG CAGCCTCGGA ATTGGCCGCA GCCGTCCGGC TCGACCCCGG CGACCCCGGG CTCTCGAACA ACCTGGGGCT CGCCCTCTCG GCGCTTTCCC GGGGCGAGGA GGCGAAGGAC GCCTTCGAGG AGGCGATCCG CCTCGACCCG CTCTACGCCG AGCCCCACAA CAACCTCTCC ATCCTCTTCG AGCGTTTCGG GGAGAGCGCG CACGCCATAG CGGCCGCCCT TGAGGCGCTC CGGCTGAAGC CGGAATTCCC CGAGGCGCAC CTGAACCTCG CCAACGCCCT CAAGTCCCAG GGGAGGCATC AGGAGGCGAT CGCCCACTAC CGTGAGGCGC TGAGGCTTCG CCCCGACTAC CCCGAAGCGG AAAGCTCGCT TCTCTTCGCG CTTCTTTACC CCGCACACAC CCCCGAGGAG GAGCTCTTCG CCGAGCACGC AGCCTTCGGG GCCCGCTGCC GCTTCGCAGC ACCCAGGCAC CTGAACGACC CGGACCCGGA GCGCCCGCTG AAGCTCGGCT ATCTCTCCGC CGACTTCCGG GAGCACGCCG TGGCCCGCTT CATCGAGCCG GTCTTGGCCC GCCACGACCG GGCCCTGTTC CAGGTCTATT GCTACTCGAA CGTCCCGGTC CCGGACCAAA GAAGCGAGAA GCTGGCCTCC ATGGCCGACT GTTTCCGGAA CATAGCCGGG ATGACGGACC AAAAGGTCGA GGAGCTGGTG CGCGCGGACG GGATCGACAT CCTGGTGGAC CTCTCCGGGC ACAGCGCGGG AAACCGCCTT CCCGTCTTCG CCCGCAGGCC CGCGCCGGTA CAGGTCACCT GGCTCGGCTA CCCCTTCAGC ACCGGGCTCG ATGCCATCGA TTACCGCATC ACCGACGCCG TCTGCGACCC CCCGGGCGAG ACCGAGCGCT ACCACAGCGA GGAGCTCTTG CGGCTTCCCG GAACCTTCTC CTGCTTTCTC CCCCCCGATG ATGCGCCCCC CCCGGGGCCG GCGCCCTGCA TCACCAGCGG CAGGGTCACC TTCGGCTCCT TCAACAACCC GGCGAAGATC ACCCCGGAGA CGGTGCTCCT TTGGTCCGGG GTGCTGCGCG CGGTCCCGGG CTCCCAACTC CTCTTGAAGG GGTATTCGCT CGCCTGCGCC GAGACGAGGC TGCGCCTGGA GGAGACCTTC GCCGGGCACG GCATCGAACG CGAACGGCTG GAGCTTCTGG GTAACACCCC CTCCTATCGG GACCACCTGT CGCTCTACGA CCGGGTCGAC ATCGCCCTGG ACAGCTACCC CTACAACGGC ACGACTACCA CCTGCGAGGC GCTCTGGATG GGGGTCCCGG TGGTGACGCT GGCGGGCTCC GCCCACCGCT CGCGTGTGGG TGCCAGCATT TTGCAGGCGC TGGGGCTTGA GGGGCTGGTG GCGCACGAGG CGCGCAAGTT CGTGGTACTC GCCCAGGCTT TGGCCGGGGA CCGGGAGAGG CTCTCCGGCC TGCGGACCAC GCTGCGGCAG ACCATGGCCG CCTCCCCCCT CACCGACGGC GCCTCCTTCA CCCGCCATCT GGAAAAGGCC TGGCGCGACA TCTGGGGGAG GTGGTGCCGC AGCCATCCGG CCCAGGCGCC GGACCCCGCG GTGCAGGGGG CGCAGTACCT GCAGCACGGC AGGCTCGACC GGGCGCTCTC GCAGTTCCTG ATACCTTTGC GCGGCGGGGA GAGGAGCACC CTCGGGGGTA TTCAGGAGGC GCTCCGCCTG CAGCTGGCGG CGGACCAGGC GCGCGCGCTG GCACTAGACG ACCCGCTGGC CTTCCGGGAG GAGGAGCCGG AGCATTTGGG CAGCGAGACC CTGGCCGAGA CGGCCGAACT TCTGGTTGCC GCCGGCTTTG TGACGCCGGC AGAGCTCATC TGCCGCTACC TGGGCGACCG CGGCTGCCTG AGCCCCCGGG TGAGCCGCAC CTTGGCCGAG GTGGCGCTCG CCATTGGGAA GCCTGAAGTC GCGGTACGCG AATTCGAACA CGCCCAGGCT GCAGGTGACC GCTCCCGCGC CACCCGCATC AAGCTGGTGA AGGCGCAGGA GGCGGAGCGG CTCTCCCCAC CTCCGGAGAG AGGGGAGCGC TTTCTTCTCA TCAAGGCCTG GGGATACGGT TTCTGGAGCG ACGTGAACAT GCTCTTGGGG CAGTGCCTCT TGGCGGAGAT CACCGGGCGG GTCCCGGTGG TGCACTGGGG GGGAAATTCA CTTTTCTCCG ACGATCCCGG GAAAAACGCC TTTCTGAGCT TCTTCCTCCC CTTCAACGGC ACCGGCATCG GCGAGCTCGC CGCCCGCGCG CGGAGCTTCT ATCCCCCCAA GTGGAACCGG GAGAACCTCC TTTTGGACGA GCTCAACAAG GAGGAGGGGC CCTGGTCCCG CTTTTCCTCC CTCTACGCCC TGGAGCGCGG CGAGGAGGTG GTGGTAGGGG ATTTCCATTA CGGCGTGAAT GATCTCATCC CCTGGATCCC GCCGGAGCAC CCGCTTTACG GGCTCGACCA GGACGCGCTC TGCCTGCAGC TTTACCGGCG CTACCTAAGG CCTAAGCCTG AGCTGGAGCA GCGCGCCGAG GCCTTCTTCA ACCGGGAGTT CTCAGGCCGC CCCGTGCTGG CGCTCCACGT CCGCGGCGGG GACAAGGGGG GAGAAGATCC CGGCCTTCAC CGGCTGAACG CCCTCTATCA CCCACGGATC GAGCGCTTCC TTAGCGAGGA GCGGGAGGGG CGCCTTTTCC TTCTCACCGA CGACGAGAAG CTCCTCTCCT CCTACAGGGA GCGCTACGGG GACCGACTCT CCCACACCGT CTCGACCCGC ACCGGCTCCA GCCTCGGGGT GCATTACCAG GAGCAGGCGG ACCGCAGGGC GCTGGGCGAG GAAGTGCTAG TCGACGCGCT GATTGCCTCG CGCTGCCACC TTTTCCTCGG CAACGGCTTT TCCAACGTCT CCCTGGCGGT GGCCCAGATG AAGCAGTGGG AGCCGGGGAG CTGCGTCCTT TTTGGCGCCC GGCTGGACCG GGTCCGGCAG ATGACCCTCT ACAGGAGCTG A
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Protein sequence | MTAPESAREL FLAGNALFGA GDLSGASECY RRALQLDPGY AEACFNLGCT LDRLSGPAEA LPHLARAVEL SPEWSRARGS LGFALARLGR MGEAASELAA AVRLDPGDPG LSNNLGLALS ALSRGEEAKD AFEEAIRLDP LYAEPHNNLS ILFERFGESA HAIAAALEAL RLKPEFPEAH LNLANALKSQ GRHQEAIAHY REALRLRPDY PEAESSLLFA LLYPAHTPEE ELFAEHAAFG ARCRFAAPRH LNDPDPERPL KLGYLSADFR EHAVARFIEP VLARHDRALF QVYCYSNVPV PDQRSEKLAS MADCFRNIAG MTDQKVEELV RADGIDILVD LSGHSAGNRL PVFARRPAPV QVTWLGYPFS TGLDAIDYRI TDAVCDPPGE TERYHSEELL RLPGTFSCFL PPDDAPPPGP APCITSGRVT FGSFNNPAKI TPETVLLWSG VLRAVPGSQL LLKGYSLACA ETRLRLEETF AGHGIERERL ELLGNTPSYR DHLSLYDRVD IALDSYPYNG TTTTCEALWM GVPVVTLAGS AHRSRVGASI LQALGLEGLV AHEARKFVVL AQALAGDRER LSGLRTTLRQ TMAASPLTDG ASFTRHLEKA WRDIWGRWCR SHPAQAPDPA VQGAQYLQHG RLDRALSQFL IPLRGGERST LGGIQEALRL QLAADQARAL ALDDPLAFRE EEPEHLGSET LAETAELLVA AGFVTPAELI CRYLGDRGCL SPRVSRTLAE VALAIGKPEV AVREFEHAQA AGDRSRATRI KLVKAQEAER LSPPPERGER FLLIKAWGYG FWSDVNMLLG QCLLAEITGR VPVVHWGGNS LFSDDPGKNA FLSFFLPFNG TGIGELAARA RSFYPPKWNR ENLLLDELNK EEGPWSRFSS LYALERGEEV VVGDFHYGVN DLIPWIPPEH PLYGLDQDAL CLQLYRRYLR PKPELEQRAE AFFNREFSGR PVLALHVRGG DKGGEDPGLH RLNALYHPRI ERFLSEEREG RLFLLTDDEK LLSSYRERYG DRLSHTVSTR TGSSLGVHYQ EQADRRALGE EVLVDALIAS RCHLFLGNGF SNVSLAVAQM KQWEPGSCVL FGARLDRVRQ MTLYRS
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