Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3695 |
Symbol | |
ID | 6780559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4222643 |
End bp | 4224394 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642769690 |
Product | DNA primase |
Protein accession | YP_002140483 |
Protein GI | 197120056 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCCGG ATGAAAAGGT CAGGGAGGTG CGCGAGCGGG CTCCTATTCT CCAGGTCATC TCCGATTACA TGAGCCTCAG GAAATCGGGG GCGAACTACC AGGGCATCTG CCCTTTCCAC GGCGAGAAGA CCCCCAGTTT CAACGTGAAT CCCGCACGCG GAATCTTTCA CTGCTTCGGC TGCGGTGCAG GCGGCAACTC GTTCGATTTC GTGATGCGCA TGGAGGGGCT GAGTTTCCCC CAGGCGGTGA AGTTCCTCGC CAAGAAGGTC GGGGTCGAGA TCCCCGAGCG GCCTCTTTCG CGCGACGAGA AGCGCAAGAT GGACGAGCAG GAGCAGGCCT TTCACATCAA CGACCTAGCC TGCGAGTACT ACCGTCGGGT GCTGGAGTCG GACGAGGCGG GCGCTGCCGG GAGAGGATAC CTGCAGCAGC GCGGCGTGGA CCAGGAAACT GCCGCCACCT ACCGCATGGG CTTTGCTCCG GCGGGATGGG ACAACCTGGC GAAATTCCTC CAGAGAAAAG GGGTGCCGCA GGAGCAGGCC GAGAAGCTGG GGCTTTTGAG GAAAAGGGAG GGAAGGGACG GCTATTACGA TACCTTCCGC AACCGGCTTC TCTTCACCAT CTCGGATCTC CATGGCCGCG CCATCGGTTT CGGCGGACGG GTCATGGACG ACTCGCTCCC TAAATACATC AACTCCCCGG AGTCGGTGGT GTACCACAAG AGCGAGGTCC TCTTCGGAGT CGATCTCGCC AAGAAGGGGA TGCGGGAGCA GGGAAGCGCC ATCGTCGTCG AAGGGTACTT CGACCATCTG GCCCTTTACC GGGCCGGTTA CACCAACGTG GTCGCCACCT GCGGCACGGC GCTGACGCCG CCGCACGTGA AGCTTCTCAG GCGCTACGCC GAGCGCGCCT ACATGCTCTT TGACGGAGAC GAGGCAGGAC GCAAGGCGAC GGTCCGCTCC ATGGAACTCT TCCTGGAGGA GGGGTTTCCG GCGCGGGTGG TGGAAGTCCC GTCTGGGGAC GACCCGGACA CCTTCATCCG ACGCGAGGGA GGTGCGGCTT TTGCGCCCCT TTTGGAACAG TCTCTTCCCA TCTTCGAATC GTTTTACCTA GGCGTGTTGA AGAGCCTCGA CATCCGTGGC GTCGAGGGGA AGGTGGCCTT CGTGAACGAG GTCTCGCCGC GGCTCTCCAA GATATCGGAC CCGGTCGAGC GCGGGCTTTA CGAGAAGGAG ATCTGCCGGG CGGTCGGGAT CGACCAGGCG ATGCTGCACA AGAGGGTGGG GATACCCGCC GCCGCGCCGC GCCCCCAACA GTCGAAGGCG GCGCCGCCGC GCAATGCAGC CACCGAAGAG GTGCTCCTGA CGCTGATGGC GAAGTATCCC GAAGTCGTAC TAAGGGTTCG GGACCACGGC GCCGATAAGC TTTTCAGCGG CGCTCATCTC AGGCTCGCCG AGGCCATGAT CGCGGAGGCG GGGCAGGGGG ACCTGGACCT CTCCCGCGTG CTGGAGCAAA TAGAATCGCC CGAGGAGCGC AGCCGCCTGT TCTCGCTTTT TGTTGAGGAT GCGCACCTGG AAGACATGAA CGCCGTCAAG GCGTTCGAAC AGTGCTGCCA AGCCCTGGAG CGGCATGCTC TGAAGGGGGG CGGCAAGGCC CTGGCGCGAG AGCTTGCCAC GGTCGATCCG GATTCTCCCA GATACCTGGA GATTCTGGCT GAACTTGAGC GGTTGCGTAA TAAAAAATCG AAATTACTAT AG
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Protein sequence | MIPDEKVREV RERAPILQVI SDYMSLRKSG ANYQGICPFH GEKTPSFNVN PARGIFHCFG CGAGGNSFDF VMRMEGLSFP QAVKFLAKKV GVEIPERPLS RDEKRKMDEQ EQAFHINDLA CEYYRRVLES DEAGAAGRGY LQQRGVDQET AATYRMGFAP AGWDNLAKFL QRKGVPQEQA EKLGLLRKRE GRDGYYDTFR NRLLFTISDL HGRAIGFGGR VMDDSLPKYI NSPESVVYHK SEVLFGVDLA KKGMREQGSA IVVEGYFDHL ALYRAGYTNV VATCGTALTP PHVKLLRRYA ERAYMLFDGD EAGRKATVRS MELFLEEGFP ARVVEVPSGD DPDTFIRREG GAAFAPLLEQ SLPIFESFYL GVLKSLDIRG VEGKVAFVNE VSPRLSKISD PVERGLYEKE ICRAVGIDQA MLHKRVGIPA AAPRPQQSKA APPRNAATEE VLLTLMAKYP EVVLRVRDHG ADKLFSGAHL RLAEAMIAEA GQGDLDLSRV LEQIESPEER SRLFSLFVED AHLEDMNAVK AFEQCCQALE RHALKGGGKA LARELATVDP DSPRYLEILA ELERLRNKKS KLL
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