Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3645 |
Symbol | gatB |
ID | 6780509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 4169547 |
End bp | 4171013 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642769640 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_002140433 |
Protein GI | 197120006 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATC AGGTCGTCAT CGGGCTCGAG GTCCACACCC AGCTCACCAC CAACACCAAG ATCTTCTGCG GCTGCTCGAC CCGCTTCGGG GCGGAGCCGA ACTCCCAGAC CTGCCCGGTC TGCCTCGGCT TACCAGGCGC GCTCCCGGTA CTGAACCAGC AGGTGGTGGA ATACGCCATC CGCGCCGGAC TCGCCACCAA CTGCTCCATC ACCAAAAGGA ACGTCTTCGC CCGGAAAAAC TACTTCTACC CTGACCTCCC GAAGGGTTAC CAGATCAGCC AGTTCGACCT CCCCATCTGC CAGCACGGCC ACCTGGACAT CGAGGTGGAG GGCGAAAAGA AACGGATCGG GATCACCCGC ATCCACATGG AGGAGGACGC CGGCAAGTTG GTGCACGCTG ACATCCCCGG GGTGGACGAT TCCTGCGTCG ACCTGAACCG CGCCTGCACG CCGCTACTGG AGATCGTCTC GGAGCCGGAC ATGCGCTCCC CGGACGAGGC AATCGCCTAC CTGAAGAAGC TGCACCAGAT CGTCATGTAT CTGGGGATCT GCGACGGCAA CCTGGAGGAA GGGAGCTTCC GCTGCGACGC GAACGTATCG CTCATGCCGG TCGGCTCCAA CGTCTTCGGC ACCCGCGCGG AACTGAAGAA CATCAACTCC TTCAAGTTCA TCAAGCAGGC AATCGAGTAC GAGATTGAGC GCCAGGCCGA GATCCTCGAC GACGGCGGCA AGGTGGTCCA GGAAACCCGA CTTTTCGACC CGAACACCGG CACCACCCGC TCCATGCGCG GCAAGGAGGA GGCGCACGAC TACCGCTACT TCCCGGACCC CGACCTGGTC CCGGTGATCA TCTCGGACGA CTGGATCGAG AAGGTGCGCG GCGGGCTGCC CGAGCTTCCC GAGGCGAAGC GCGCGCGCTT CATGTCGGAA GGAGGGGCCG TATTTGGCGG CTCTGCATTC GGACTCCCCG AGTACGACGC CGAGGTCCTG GTGGCAAGCC GCGAGCTGGC GCAGTACTTC GAGGACACGG TCGCGCTCTT CCCGCAGGCC AAGACCGTCT CCAACTGGGT CATGGGCGAA GTCACCCGCG CCCTCAACGA CGACAACAAC CGCTCCATCG CCGAGTGCCC GGTCACCCCG GCTCTCTTGG CCGACCTCCT GAAGCTGATG GAGAAAGGGA CCATCTCCGG CAAGATCGCC AAGACCGTCT TCGACGAGAT GTACAAGACC GGCAAGGCGT CGGAGAAGAT CGTCGAGGAG AAGGGTCTGG TGCAGGTCTC CGACACCGGA GCCATCGAGG CCATGGTGGA CGAGGTGCTG GAGAAGAACC CCGGGCAGGT AGCCGAGTAC AGGGGTGGCA AAGAGACCCT TTTCGGCTTC TTCGTGGGCC AAGTCATGCG CGCCTCCAAA GGGAAGGCGA ACCCCGCCGT CGTAAACGAA CTGCTGCTAA AGAAACTCAA CAGCTAA
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Protein sequence | MKYQVVIGLE VHTQLTTNTK IFCGCSTRFG AEPNSQTCPV CLGLPGALPV LNQQVVEYAI RAGLATNCSI TKRNVFARKN YFYPDLPKGY QISQFDLPIC QHGHLDIEVE GEKKRIGITR IHMEEDAGKL VHADIPGVDD SCVDLNRACT PLLEIVSEPD MRSPDEAIAY LKKLHQIVMY LGICDGNLEE GSFRCDANVS LMPVGSNVFG TRAELKNINS FKFIKQAIEY EIERQAEILD DGGKVVQETR LFDPNTGTTR SMRGKEEAHD YRYFPDPDLV PVIISDDWIE KVRGGLPELP EAKRARFMSE GGAVFGGSAF GLPEYDAEVL VASRELAQYF EDTVALFPQA KTVSNWVMGE VTRALNDDNN RSIAECPVTP ALLADLLKLM EKGTISGKIA KTVFDEMYKT GKASEKIVEE KGLVQVSDTG AIEAMVDEVL EKNPGQVAEY RGGKETLFGF FVGQVMRASK GKANPAVVNE LLLKKLNS
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