Gene Gbem_3629 details

Gene Information

• Locus tag: Gbem_3629
• ID: 6780493
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 4149492
• End bp: 4151489
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642769624
• Product: multi-sensor signal transduction histidine kinase
• Protein accession: YP_002140417
• Protein GI: 197119990
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2205] Osmosensitive K+ channel histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCACTTCG CACCGTTCCT GCTCATAGCC GTTTGCGAGC TGATATTGCT CTTCATCGGG 
AGGCGCACCC CGCTGCCGGG GTGGCTGCAC CTTGGCGTCT TGGTCACGGT TACCGCCGTG 
CTCCTCTTTG TCGCCGCCCG GGCCTGGAAG CGGCAGCTCC GCGTACAGGA AGGGCTGAAG 
CGCGAGTTGG AGGAGATGCG GCTGGAAGCG GTGAAAAGCG CCCGCCGCTA CAAGAGCCTC 
CTGGAGGGGG CGGGCAACGC CATCTTCATC TTCAGCGCCG ACACCGGTCT TTTGGAGGAA 
GAAAACCGCG TGGGACGGGA GCTTTTGGGT TTCAGCAAGG AGGAGCTCGA CTCCATCCAG 
GCGCGCGACC TGTTGCATCC CGACGAGCAT GAGCGGTTCC GCTGCTTCCT CTACCAGGTG 
AAGCGCAACG GGCGCGGAGA ACTGGACTCG GTCCGGATCA GGAAGAAAAA CGGCACCTTC 
TTCCTGGCCG AGATCAATGC CCGGCTCATC GACTTGGGGG ACGAGCAGGT GGCGCACTGC 
CTCATGCGCG ACATCACCAA GAAAAGGCGC ACCGAAAAAG AGATCTGGCA AAGAAACCGC 
GAGCTTTCCA TCCTCAACGA CATACTCACC GGCATGAACC ATTCCGCCGA CCTGGAACAG 
GAGCAGCAAA GAACCCTGTG GGAGATCATG GAGCTCTTCG ACGCAGGGGG GGGCACCATG 
CACCTGTACC GCGGCGACCA GGGAAGCGCC AGGCTTTGCG CCAGTTGCCA CGTCTCTGCC 
GAATTGGAGC AGCGCCTCTC CCAAAGCCTC GCCCAAGACC CGGAGCGCTT CCTGAAGGTG 
AAAAGGCTGA AGGCGCCGCA GATGAAGGAG TTGGGCGCCG CCGCGGAGGG ATGGCAATGC 
CTCACCTCGG TCCCCATCAG CGCGCAGGAG CACCTGGTCG GCGTAATGCA CCTCATGCAT 
CGCGACCCCT GCCGCTACAG CGCCGAAGAA ATCCGCTTCC TGGAAAGCGT CGGCAAGCAG 
ATGGGTAACA TCATCGAGAA AGGGAGGCTC TTCGCCGAGC TGAACTGGAA AAGCGGCGAA 
CTGCTCCGCT CGCACCGCCT TTTGGAGAAG AGCAGCCACA ACCTCTCCGT TTCCGAGATC 
CGGCTCAAGC AGAATCTGGC CTTGGTGGAG CAGGCTAGCC TGGAGCAGAA CCGGCTGGAC 
CGGATGAAGA ACCAATTCCT GGGGATGGTC TCCCACGAGT TCAACACCCC GCTCACCAGC 
ATCATCTCCG GCGTCGAGCA TCTGCTGCAA AACGGCTGGC ACAGCGAGCA GGAGGCGCGC 
TCCGTGCTGG AACTGGTGCG GGACGGCGGG CTCAGGCTGA AGGGGCTGGT CGCCGACCTT 
TTGAAGCTGA TCAAGGTGGA GGCCAGGCGT GGTGCGCTGG AGACCTCGGC GGTGCACCTG 
CGGCATTTCC TGGACGAACT CGCGGCGCAG TTGCAGCCGC AGCTGGAAGA GCGGGGTCAG 
CGCGTCACCC TGGCGGGGTT GGAAGAGCTC CCGTTCTTCG ATGCGGACCG CAACTACCTG 
GAGCGCGTCT TCGGCGAGCT TTTGCAAAAC GCCATCAGGT TCAGCCCACA CAAAGGGGAG 
ATCCTGGTGA CCGGGCGGGT GGTGGACCGC CCTGCCCTCC TGGAGCGCAG GGAAACCCTG 
GAGCGCTTCA ACCCCGAGTT CCTCAGGCGC TGCGGCGAAC GCTGCTATCT GGAAGTGGAG 
GTGCGGGACA ACGGCATCGG CATCCCCCCC GAGGAGCAGC AGGGGATCTT CGGGATCTTC 
TACGAGGTCG GCGAGATAAG GCACCACTCC AGCGGCATGA GCCGCGAGCA GGGAAGAGGG 
GCGGGGTTAG GTCTCGCCAT GGTGAAGGGG ATGGTGGAGG CCCACGGCGG GATGGTGTGG 
GTGGAGAGTG CGGGAGGAAG CTCCTTCTTC CTGGTCCTTC CCCTGGAGCA GGAAGCGATC 
CAGCCGGCGC TGTTCTGA 

 

Protein sequence

MHFAPFLLIA VCELILLFIG RRTPLPGWLH LGVLVTVTAV LLFVAARAWK RQLRVQEGLK 
RELEEMRLEA VKSARRYKSL LEGAGNAIFI FSADTGLLEE ENRVGRELLG FSKEELDSIQ 
ARDLLHPDEH ERFRCFLYQV KRNGRGELDS VRIRKKNGTF FLAEINARLI DLGDEQVAHC 
LMRDITKKRR TEKEIWQRNR ELSILNDILT GMNHSADLEQ EQQRTLWEIM ELFDAGGGTM 
HLYRGDQGSA RLCASCHVSA ELEQRLSQSL AQDPERFLKV KRLKAPQMKE LGAAAEGWQC 
LTSVPISAQE HLVGVMHLMH RDPCRYSAEE IRFLESVGKQ MGNIIEKGRL FAELNWKSGE 
LLRSHRLLEK SSHNLSVSEI RLKQNLALVE QASLEQNRLD RMKNQFLGMV SHEFNTPLTS 
IISGVEHLLQ NGWHSEQEAR SVLELVRDGG LRLKGLVADL LKLIKVEARR GALETSAVHL 
RHFLDELAAQ LQPQLEERGQ RVTLAGLEEL PFFDADRNYL ERVFGELLQN AIRFSPHKGE 
ILVTGRVVDR PALLERRETL ERFNPEFLRR CGERCYLEVE VRDNGIGIPP EEQQGIFGIF 
YEVGEIRHHS SGMSREQGRG AGLGLAMVKG MVEAHGGMVW VESAGGSSFF LVLPLEQEAI 
QPALF