Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3557 |
Symbol | |
ID | 6780420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4071670 |
End bp | 4072563 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642769551 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_002140345 |
Protein GI | 197119918 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATATTGA CGGCAAGGGT AGATGCAGAA CTAGCAGGGA CACGATTGGA CGACGCGGCG AAGACGCTTT TTCCGCAGTA CTCGAAGGGC GAGATCCGGC GCATCATCGA CTGGGGCGGT TGTTACCTCT CGCAGACGCT GGTGCGGGTG GCTTCTCGCA CCGTGAAGGA GGGGGAGGAG ATCGCCCTCG GGATCATGGA GGCCGAGCGC TGCATCGAGC TCGCCTATAA AAAGGAAGAG CTTCTCTACG AGGACAAGGA TTTCCTGGCG GTCTACAAGG CGGCTGGTTT CAACAGCCAG CGCACCCCGT ACCAGTTGAA GGGTACGGTG GAGTACGCTG TGGAATGCTA CATGAAGAGC ATCGGGCTCA GGGATCCGTC GCGCGTGGTG CACCGACTGG ATCGCGGCAC GAGCGGCGTG ATGTTTTTCC CCAAGCACAA GCAGGCCGCG ACCCTGATCT CGAACCTGCT CAAAGACGGC AAGGTGCAAA AGACCTATTG GGCGCTGGTG GCGGGTTCGC CGGACCAGCA GAGCTGGAAG GTGGACGCGC CGCTGGGGAA GGTGAGCAAG TTCAAGTACG GAGTAGCCCT GAATGGGAAG CCGGCGAGGA CGCTGTTCCG GGTGGTCGGC GAGGGGGCGG GGGTGACCGC GGTAGAGGCG AAGCCTTTGA CCGGACGCAC GCATCAGATC CGGGTGCACC TGGCCCACTC CGGTTTTCCC ATCATCGGGG ACGAGACCTA CGGCGGCATA CCCGCAGCCC GAATGATGCT GCACTGCCGC GGCATGCGCT TTACCGGGGC GAGGGGAAAG GTCATCGAGG CATTCGCCCC CATTGATGCA GACTTCAGGG CGGCTGCAGC GGAAGGGATC TGGGAAGAGA GCGCGGAGCA GTAG
|
Protein sequence | MILTARVDAE LAGTRLDDAA KTLFPQYSKG EIRRIIDWGG CYLSQTLVRV ASRTVKEGEE IALGIMEAER CIELAYKKEE LLYEDKDFLA VYKAAGFNSQ RTPYQLKGTV EYAVECYMKS IGLRDPSRVV HRLDRGTSGV MFFPKHKQAA TLISNLLKDG KVQKTYWALV AGSPDQQSWK VDAPLGKVSK FKYGVALNGK PARTLFRVVG EGAGVTAVEA KPLTGRTHQI RVHLAHSGFP IIGDETYGGI PAARMMLHCR GMRFTGARGK VIEAFAPIDA DFRAAAAEGI WEESAEQ
|
| |