| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3552 |
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| Symbol | |
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| ID | 6780415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4066084 |
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| End bp | 4068462 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642769546 |
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| Product | peptidase U32 |
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| Protein accession | YP_002140340 |
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| Protein GI | 197119913 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATGA AAGAGAAAAA AATCGTCGTT AATAAACCCG AACTTCTCTC CCCCGCGGGC
TCCTTGGAGG CTTTTTTCGC CGCCATGGAG AAAGGGGCCG ATGCCGTCTA TGCCGGTCTG
CGCGACTTTT CCGCGCGCGC CAAGGCGAAG AACTTCACCC TGGCGCAGAT GGAGCGCATG
ACCGCCTACG CCCACAGCCT CGGGAAGAAG ACCTACGTCA CCATCAACAC CCTGGTAAAG
GAATCTGAAC TCCCCCTGCT CATCGACAAC CTGGCTGCGC TGGAAGCGAT GCGGGTTGAC
GGGGTCATCC TGCAGGACAT GGCGGTGGCG CGCCTGGCAC GCGAGTTCTT CCCGGGCATC
CCGCTGCACG CCTCCACCCA GATGACCATC CACAACTCCT TGGGGGTGCG CCAGCTCGAG
GAGTTGGGAT TCGAGCGCGT GGTGCTTGCC CGCGAGCTGC ATATCGACGA GATCAAGTCC
ATCGTTGCCT CAAGCAAGGC CGAAATCGAG TGCTTCATCC ACGGCGCCCT CTGCTTCTCC
TTCTCCGGCC AGTGCTATTT CTCCTCGTTC CTGGGCGGGC ACAGCGGCAA CCGCGGCCGC
TGCGCGCAGC CCTGCCGCCG CCAGTACAAG CACAAAGGAA AGGAAGGGTA CTACCTTTCC
ACCAACGACT TCTCCAGCAT CGAGATGATC CCCCAGTTGA TCGAGGCAGG GGTCGCCTCG
CTCAAGATCG AAGGGAGGAT GAAATCCGCG GAGTACGTAG CCAGCGTCAT CGGCGCCTAC
CGCATGGTGC TCGACGCTCC GCAAGGTTCC TACGACGCCG CGGTCGCCGA GGCGAAGGCG
CTCTTGAAAC TTTCCTTCGG CCGCGTTCCG ACCAAGGGGT TCCTCGCCTC CCACAACCCG
ACCGACATCT CCACCCCGTC CATCAAGGGG GCGACCGGCC GCTACTTGGG CGACATCCGC
GAGATGCGCG GCAACCGGAT CAGCTTCGAC ACCCGCGACC GCCTCCACGT TGGGGACCGT
ATCCGGGTCC AGCCCAAAAG CGACATGGCC GGGCGCGCCT TCACCATCAA GGAGCTTTAC
CTCGGCGGCA AGAAGGTGAT GAACGTGAAG GAGAACACCC TGGTCTCCAC CCCGTCCCCT
TTCCCGTTCA AGCTGGGGGA CTCGGTCTTC AAAGTCTCCT CGGAAACCGC CTTCACCATG
AGCGAGAACG CCTGCCTGAA AAGGCTGGAG GGGGCCAAGG GCGACAGCAT CCCCTGCATG
CTCAAGCTGT CGCACCAGGA CCAGTCGCTG CGCATAGAGG CTGAGGTGCT GGGGCAACGT
TTCGCCACCG AATTCGAGCT GGGTCCGCTG GAACCCTCCC GCAGCAGCGA CATGGAGGGG
GTGCTCAAGG CGCAGTTCTC CAAAAGCGGC GACACCCAGT TCACCCTTGC CTCCCTTTCG
GCACCAGATT TCCCGGCCAT CATGATCCCC CCTCCCCGGT TGAAGGAAAT CCGGCGCAAC
TTCTACGCCT GGCTCGCGGA AGCGTCCGTC GGTGCCTTGA AGCAAAGAAG CGCCAGCGGC
AGGACCGAAG CGCTCGCCTC CTTGGTGCGC CAAAAATCCG CGCCGTTTAG GGGCAAGGAA
GAGCTTGCCG TCAAGATCGA GCAGGTGCGT GATTGGCACG AACTGCACCG CGACCTGGTC
GACACGGTCG TCCTCCCCGT CTCCAAGGCG AACATGCATC AGTTCCAGGG CTTTGCCAGA
AAGCTCAAAG GTAGCGAGGA CAAGGTGATC TGGCAGCTCC CCTTCATCAT CTTCGAGGCG
GAACTCCAGT TTTACCGCGA CGCGGTGGAG ATGATCATAC GCGGGGGCTT TAAGCGCTTC
GAGCTCACCA ACCTGTCCCA ATTCCAATTT TTCAAGGGGA CCGATGCCGA GCTGAACACC
GACTACCGGC TCTTCTCGCT GAACAGCCAG GCCCTTTTAT CCTGGCAGGA GCTGGGGGTG
AAGCGCGCCA CGCTGTACAT GGAGGACGAC CGGGCCAACA TGGGGCAGCT CTTGGCGAGC
GACCTGAAGA TAGAGCGTGG CGTTTTGCTC TACGCGCCCG TTCCGGTGAT CACCTCGAAG
ATTGCCATCA AGGAGATCAA AGGCGATGCG CCGCTTGCCT CCGACCGCGG CGATCTCTAT
TCAGTAAAAG TTAAAGACCA CCTGACCGTG GTTTCGGCCC AGACGCCCTT CGCACTCACC
CAGTACCGCA GCGAACTGCG CCAGATGGGT TGCGGCAGCT TCCTTCTCGA CCTGTCGCAG
TTGCAGCCGG AGGAGCGGGA GCGGGCACTG GAAGCCTACC GTAAAGGGGT TGCGGTCCAC
GCCGCCTCCG AATTCAACTA CAGCGCCGGC CTGGTTTAG
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| Protein sequence | MPMKEKKIVV NKPELLSPAG SLEAFFAAME KGADAVYAGL RDFSARAKAK NFTLAQMERM
TAYAHSLGKK TYVTINTLVK ESELPLLIDN LAALEAMRVD GVILQDMAVA RLAREFFPGI
PLHASTQMTI HNSLGVRQLE ELGFERVVLA RELHIDEIKS IVASSKAEIE CFIHGALCFS
FSGQCYFSSF LGGHSGNRGR CAQPCRRQYK HKGKEGYYLS TNDFSSIEMI PQLIEAGVAS
LKIEGRMKSA EYVASVIGAY RMVLDAPQGS YDAAVAEAKA LLKLSFGRVP TKGFLASHNP
TDISTPSIKG ATGRYLGDIR EMRGNRISFD TRDRLHVGDR IRVQPKSDMA GRAFTIKELY
LGGKKVMNVK ENTLVSTPSP FPFKLGDSVF KVSSETAFTM SENACLKRLE GAKGDSIPCM
LKLSHQDQSL RIEAEVLGQR FATEFELGPL EPSRSSDMEG VLKAQFSKSG DTQFTLASLS
APDFPAIMIP PPRLKEIRRN FYAWLAEASV GALKQRSASG RTEALASLVR QKSAPFRGKE
ELAVKIEQVR DWHELHRDLV DTVVLPVSKA NMHQFQGFAR KLKGSEDKVI WQLPFIIFEA
ELQFYRDAVE MIIRGGFKRF ELTNLSQFQF FKGTDAELNT DYRLFSLNSQ ALLSWQELGV
KRATLYMEDD RANMGQLLAS DLKIERGVLL YAPVPVITSK IAIKEIKGDA PLASDRGDLY
SVKVKDHLTV VSAQTPFALT QYRSELRQMG CGSFLLDLSQ LQPEERERAL EAYRKGVAVH
AASEFNYSAG LV
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