Gene Gbem_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3540 
Symbol 
ID6780403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4054841 
End bp4055884 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content65% 
IMG OID642769535 
Productcobalamin (vitamin B12) biosynthesis CbiG protein 
Protein accessionYP_002140329 
Protein GI197119902 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2073] Cobalamin biosynthesis protein CbiG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTAG CGATCATCGC CATAACCGGG AACGGCGCGC GACTGGGGGG AACGCTGCAA 
AGCGGAATCC CCGGGAGCCG GCTCTTCGTG ATCGAGAAGC ACGCGACGGC CGCCAGCCAA
CCGTTCTCGG AGCCGGTGCC GGCTTTGATC TCGCGCCTTT GGCCGGAGTA CGGCGGCTTT
ATCTGCATCA TGGCGACGGG TATCGTGGTG CGCTGCATCG CGCCGCTTTT GCAGGCCAAG
GACCGGGACC CCGCCGTGGT GGTGCTCGAC GACGCCGGCA AGTTCGCGGT CTCGCTTTTG
TCCGGCCATC TGGGGGGTGC CAACGCACTG GCTAACACCT GCGCGTCCCT TACCGGATGC
ACCCCCGTGG TCACCACGGC AACCGATGCC AACGACCTCC CCTCGTTCGA CCTGCTGGCG
CAGGAGAACG GCTGGGTCAT CGACGACCTG TCGCGGGTGA AGGTGCTGAA CGCTCTTCTC
CTGGAGGGAG ATGAGATCGT GGTGGCGGAC GCAACCGGCA GGGTGAGAAG GTACTGCGCG
GGTAGGGGGA ACCTCACTTT CGTGACCGAT GCGGAACAGG CCGCTGCCTC GGGTGCTGCG
GGCGTGGTCC TGGTCACCAA TCGGACGCTT CCTTCCGCGT TTGATTCGCA ACGTGCCCTG
GTGCTGCATC CGGTCGACCT TCATCTAGGC ATCGGCTGCA ACAGGGGGAC TGCCGCGGAA
GAGATCGAAG CGGTGGTCAT GGCGAACCTG GATCACTTGG GCCTTTCCAT CAAGAGTGTC
AAGTGCCTGG CGACGGCAAG GGCCAAGGAT GATGAGGAAG GGCTTCTGGC GTTCGCCGCG
AAGTTGGGAG TCCCGCTGCT CTTTTTCGAG AACGAGGAGT TGAACGCCGT CGCCGCCCCC
TCTCCCCCCT CGGCGCATGC CATGGCCGCC ATCGGCGCGC GCGGCGTGGC CGAACCGGCG
GCGCTGCTGG CAGCGGGGGG CGGGACGCTG ATACTGAAGA AGGTGAAGGA CGGCAACGTC
ACCTTGGCGA TAGCGGAGGA GTAA
 
Protein sequence
MQVAIIAITG NGARLGGTLQ SGIPGSRLFV IEKHATAASQ PFSEPVPALI SRLWPEYGGF 
ICIMATGIVV RCIAPLLQAK DRDPAVVVLD DAGKFAVSLL SGHLGGANAL ANTCASLTGC
TPVVTTATDA NDLPSFDLLA QENGWVIDDL SRVKVLNALL LEGDEIVVAD ATGRVRRYCA
GRGNLTFVTD AEQAAASGAA GVVLVTNRTL PSAFDSQRAL VLHPVDLHLG IGCNRGTAAE
EIEAVVMANL DHLGLSIKSV KCLATARAKD DEEGLLAFAA KLGVPLLFFE NEELNAVAAP
SPPSAHAMAA IGARGVAEPA ALLAAGGGTL ILKKVKDGNV TLAIAEE