| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3539 |
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| Symbol | |
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| ID | 6780402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4052285 |
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| End bp | 4054615 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642769534 |
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| Product | cobyric acid synthase CobQ |
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| Protein accession | YP_002140328 |
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| Protein GI | 197119901 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1010] Precorrin-3B methylase
[COG1492] Cobyric acid synthase |
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| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ
[TIGR01466] precorrin-3B C17-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.714834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAGC TTTTTGTAGT GGGAATCGGC CCTGGCGGCC TGAATCATAT GACCTTCGAG
GCGCGCGAGG CGGTCGAGAA GGCTGATGTC GTCGTGGGCT ACAAGACGTA CTTGGATTTC
ATCGAGCCGC TCCTCTCCGA CAAGGAGGTT GTTTCCTCGG GGATGATGCG GGAGGTGGAA
CGCTGCTCGG AGGCGCTCGC CATCGCCGCG ACCGGGAAGA CGGTGGCGCT GGTTTCCAGC
GGCGACGCGG GGATCTACGG CATGGCGGGC CTTGCCCTGG AGCTGGCGGA CGCACCCGGC
GACGGCGCGC CTTCCCCATA CCCAGGAGTG GAGATTGTGA TCGTCCCCGG TGTTTCCGCG
GTGCAGGCTG CGGCGTCGGT CCTGGGCGCT CCGCTCATGC ACGACTTTGC CGTGATCTCG
CTCTCGGACC TTTTGACCCC GCTCGATACT ATCCGGCAGA GGCTGCATGC CGCGGCCGCC
GCCGACTTCG TGGTCGCCCT CTACAACCCG CGCAGCAAGG GACGGGTCAC CCAGATCGAG
GAGGCCCAGG CCATTCTCAT CGCCGCGCGC GGTCCCAAAG TCCCGGTGGG AATCGTCAGG
AACGCTTGCC GCGAGGGTGA GGAGCGCATC GTCACCACGC TGGGGGAGAT GCTCACGCAC
CCCATCGACA TGTTCTCCAT CGTCATCATC GGCAACGCCT CGACCCGCCT TTCGGACGAC
GGCCGCATCG TGACCCCCCG CGGCTACGCG ACCCGCGGCG AGGAAAGGAA AGGGGGGCGG
AAGCAGCAGG CTAGCGCTGC AGCACCTGCG CCCAACGCGC AGGCGTTGAT GTTCTGCGGC
ACCGGTTCGG ATGTCGGCAA GTCCGTCATC ACCGCCGGGT TCTGCCGCAT CCTGAAACGC
CGCGGCGTCT CGGTCGCTCC CTTCAAGTCG CAGAACATGG CGCTCAACTC GGCTGTCACG
CCGGAGGGGG GCGAAATCGG CCGTGCCCAG GGGGTGCAGG CGGAGGCTTG CGGCATCGAG
CCGCACACGG ACATGAACCC GATCCTCCTG AAGCCGAACT CCGACACCGG GAGCCAGGTG
ATCGTGCAGG GTCGGGTGGT GCGCAACATG GGGGTGAAGG AGTACAACGC CTACAAGCCG
GAGGCTTTCC TGAAGGTGAA GGAGAGCTTC CAAAGGCTCA AGGAGCGCTT CGACTTCATC
GTGATGGAGG GGGCGGGGAG CATCGCGGAG ATTAACCTGC GCGCCCACGA CATCGCCAAC
CTCAAGGTGG CCGCCATGGC GGGGGCGCCG GCCATACTCG TGGCCGACAT CGACCGCGGC
GGCGTCTTCG CGCAGATCGT CGGCACCCTG GAACTGCTGA CGCCGGAAGA GAAGGCGCTG
GTCAAGGGGG TCATCATCAA CAAGTTCCGT GGCGACGCCT CCTTGCTCAC CCCGGGGATA
GAGTACGTGG AACAGCGCAC CGGCGTCCCT GTCTTGGGGG TGCTCCCCTG GTTCAAGGGA
ATATCGCTTC CGGAGGAGGA CAGCGTCGCC CTGCAAAGGC GCGCAAAGCC AGCGGCGAAG
GAGGGGGCGA AGCTCCTTGT CGGCGTGGTC CGCCTCTCCA GGATCGCCAA CTACACCGAC
TTCAGCGCGC TGGAGGCCGA GCCGGATGTC GAGCTCCACT ACATCGATTC GCCGCGCCAG
ATCGACTCGC TGGACCTGCT GATCCTCCCG GGGACTAAAT CGACGCTGGC GGACCTCGGC
CTGCTTAAGG AAAACGGGAT GTTCACCGCC GTGGCCCAGT TCAAGGGGCC GGTGGTGGGG
ATCTGCGGCG GGTACCAGAT GCTGGGGAAC ATGGTGCTTG ATCCGGAGCG GGTGGAATCC
GCCCATGACA GCGAGGCGGG GCTTGGTCTC CTGGACGTGG TGACCACCAT GCTCAAGGAG
AAGCAGACCC ATCTGGTCGA GGCGACGCTG CTGGAGGCGG GGCAGGGGCT GGTTTCGGGT
GCTGCGGCCG CGCTCACCGG GTACGAGATC CATTTGGGAG AAAGCGTCCT CGGCAGCGGC
GCACTTCCCT TCGCCCGTAT CGCCAGGCGC TCCGGAGGCG CCACCAGCAC CGAAGACGGC
GCGGTGTCGC AGGACGGGCG GGTTTTCGGC ACCTACCTGC ACGGCATCTT CGATAACCAC
GGTTTCAGGA CCGCGTTCCT GAACCGGATC CGGCGCGCCA AGGGTATGCC GGAACTGGCG
GAGGCGGCGC AGGTTGCGGA TCCGTTCGAC CAGTTGGCCG ACCACATGGA AGAGCACTTG
GACCTGGAAC GGATCTTCGG GATCTGCAAT GTCAATGAAC TTTTTGCCTG A
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| Protein sequence | MSKLFVVGIG PGGLNHMTFE AREAVEKADV VVGYKTYLDF IEPLLSDKEV VSSGMMREVE
RCSEALAIAA TGKTVALVSS GDAGIYGMAG LALELADAPG DGAPSPYPGV EIVIVPGVSA
VQAAASVLGA PLMHDFAVIS LSDLLTPLDT IRQRLHAAAA ADFVVALYNP RSKGRVTQIE
EAQAILIAAR GPKVPVGIVR NACREGEERI VTTLGEMLTH PIDMFSIVII GNASTRLSDD
GRIVTPRGYA TRGEERKGGR KQQASAAAPA PNAQALMFCG TGSDVGKSVI TAGFCRILKR
RGVSVAPFKS QNMALNSAVT PEGGEIGRAQ GVQAEACGIE PHTDMNPILL KPNSDTGSQV
IVQGRVVRNM GVKEYNAYKP EAFLKVKESF QRLKERFDFI VMEGAGSIAE INLRAHDIAN
LKVAAMAGAP AILVADIDRG GVFAQIVGTL ELLTPEEKAL VKGVIINKFR GDASLLTPGI
EYVEQRTGVP VLGVLPWFKG ISLPEEDSVA LQRRAKPAAK EGAKLLVGVV RLSRIANYTD
FSALEAEPDV ELHYIDSPRQ IDSLDLLILP GTKSTLADLG LLKENGMFTA VAQFKGPVVG
ICGGYQMLGN MVLDPERVES AHDSEAGLGL LDVVTTMLKE KQTHLVEATL LEAGQGLVSG
AAAALTGYEI HLGESVLGSG ALPFARIARR SGGATSTEDG AVSQDGRVFG TYLHGIFDNH
GFRTAFLNRI RRAKGMPELA EAAQVADPFD QLADHMEEHL DLERIFGICN VNELFA
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