| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3506 |
|---|
| Symbol | |
|---|
| ID | 6780369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 4018647 |
|---|
| End bp | 4019213 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642769501 |
|---|
| Product | heat shock protein GrpE |
|---|
| Protein accession | YP_002140295 |
|---|
| Protein GI | 197119868 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.175972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGA AAAAGCACGA TTCGCATCAG CATGAGAAGA AGGCGGACGC GTCGCAGGAA
AAGGTCGAAG TGGCGCAGCC GCTTTCCGAC GCCGATCGCA TCAAGGAACT TGAAGAGGCG
CTGGCCGCCA AGGGACTCGA ATCGGCAGCC AACTGGGACA AGTACCTGCG CGAGAGGGCC
GACCTTGAGA ACTACAGGAA GCGGGTGCAA AAGGAGAAGG AAGAGATCCT CAAGTACGGC
AAAGAGGAGG TCATAATGGA GATCCTCCCG GCGCTGGACA ACCTGGAGCG CGCCATCGAC
CACGCCAACG AAGAGTCGGC GATCGTCGAG GGGGTGAGGC TGACCCTCAG CATGCTCCTC
TCCGCACTGA AGAAGTTCGG AGTGACCCCG GTCGAGACGC CGCAAGGGAC ACCCTTCAAT
CCCGAGTTCC ACCAGGCCAT GGGGCAGGTG GAGAGCGCGG ACCAGGAGCC GAACACCATA
GTTGCCGTGT TCCAGAAGGG GTACCTCTTA AACGAGCGCC TGCTCCGCCC GGCCATGGTC
ACGGTAGCCG TCAAGCCTGC GGCTTGA
|
|---|
| Protein sequence | MDKKKHDSHQ HEKKADASQE KVEVAQPLSD ADRIKELEEA LAAKGLESAA NWDKYLRERA
DLENYRKRVQ KEKEEILKYG KEEVIMEILP ALDNLERAID HANEESAIVE GVRLTLSMLL
SALKKFGVTP VETPQGTPFN PEFHQAMGQV ESADQEPNTI VAVFQKGYLL NERLLRPAMV
TVAVKPAA
|
|---|
| |