Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3505 |
Symbol | dnaK |
ID | 6780368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4016560 |
End bp | 4018482 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769500 |
Product | molecular chaperone DnaK |
Protein accession | YP_002140294 |
Protein GI | 197119867 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00228392 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAG TAATAGGAAT AGACCTCGGG ACCACCAACT CCTGCGTGGC AGTGATGGAA GGTGGGGAAC CGGTTGTCAT AGCGAACGCA GAAGGTAGCC GCACCACCCC TTCCATGATC GCCTTCGCCG AAAGCGGCGA GCGTCTGGTG GGGCAGCAGG CCAAGCGCCA GGCCGTCACC AACCCGGAAA ACACCCTGTA CGCCATCAAG CGCCTGATCG GCCGCAAGTT CGAAACCGAG GCGGTCAAGA AGGACATCGC CATCTCCCCG TTCAAGATCG TCAAGGCCGA CAACTCCGAC GCCTGGGTCG AGGTCAGGGG CCAGAAGTAC TCGCCCCCCG AGATCTCTGC CATGGTGCTG CAGAAGATGA AGAAGACCGC CGAGGACTAC CTGGGCGAGG CCGTCACCGA CGCGGTCATC ACCGTTCCCG CTTACTTCGA CGACTCCCAG CGCCAGGCGA CGAAAGACGC CGGGAAGATC GCCGGCCTCA ACGTGCTCCG CATCATCAAC GAGCCGACCG CGGCAGCGCT TGCCTACGGC CTCGACAAGA AGAAGGACGA GAAGATCGCC GTATTCGACC TTGGCGGCGG CACCTTCGAC GTCTCCATCC TGGAACTCGG CGAAGGGGTC TTCGAGGTGA AGTCCACCAA CGGCGACACC TTCTTAGGCG GCGAGGACTT CGACCAGAAG ATCATCGACC ACATAGCCGA CGAGTTCAAA AAGGACCAGG GGATCGATCT CCGCGGCGAC AAGATGGCCC TGCAGAGGCT GAAAGAGGCG GGCGAGAAGG CGAAGTGCGA ACTCTCCACC TCGCTTGAGA CCGACATCAA CCTCCCCTTC ATCACCGCCG ACGCCTCCGG GCCCAAGCAC CTGACCATGA AGCTCACCCG CGCTAAGCTC GAGTCCATCT GCGCCGAGCT GATCGCCAAG CTGGAAGGCC CCTGCCGCAC CGCACTGAAA GACGCCGGGC TCTCCGCCTC CGACATCGAC GAAGTCATCC TGGTCGGCGG CATGACCCGC ATGCCGATCG TGCAGAAGAA GGTGCAGGAC ATCTTCGGCA AGCTCCCCAA CCGCGGCGTG AACCCCGACG AGGTGGTCGC CATCGGCGCC GCCATCCAGG GCGGCGTTCT GCGCGGCGAC GTGAAGGACG TGCTCCTTCT CGACGTCACC CCGCTTTCCC TCGGGATCGA AACCCTGGGC GGCGTGTTGA CCAAGCTGAT CGACAAGAAC TCCACCATCC CCTGCAGAAA GAGCCAGGTC TTCTCCACCG CCGCCGACAA CCAGCCGGCG GTCAGTATCC ACGTGCTGCA GGGCGAGCGC GAGATGGCGG CCGACAACAA GACGCTCGGC AACTTCGAGC TCTCCGGCAT TCCGGCGGCT CCCCGCGGCG TCCCGCAGAT CGAGGTGACC TTCGACATCG ACGCCAACGG CATCGTCCAC GTCTCCGCCA AGGACCTCGG CACCGGCAAG GAGCAGTCCA TCCGCATCAC CGCTTCCTCT GGCCTTTCCA AGGAGGAGGT CGAGAAGATG GTGCGCGAGG CCGAGGCGCA CGCGGCCGAC GACAAGAAAA AGCGCGAGCT GATCGAGGCG AAGAACCAGG CGGACAACCT GATCTACCAG ACCGAGAAGT CCCTGACCGA GTTCGGCGAC AAGATCGACG CCTCCGAGAA GCAGAAGATC GAGGAAGGGG TCGCCGCCCT CAAGAAGGCC CTGGAAGGAA GCGACGCCGA CGAGATCAAG AAGGCAAGCG ACTCCCTGAT GCAGGCTTCC CACAAGCTGG CCGAGGCGGT CTACGCTAAG ACCCAGGGCG CGGGCGCCGA GGGCGGCGAG CAGCCGCACG GTGAGCAGGA GGCCGGCGGC GCGGCCAAGG GGGAGAAGGT CGTCGATGCC GACTTCGAGG AAGTGAAGGA CGACAAGAAG TAA
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Protein sequence | MSRVIGIDLG TTNSCVAVME GGEPVVIANA EGSRTTPSMI AFAESGERLV GQQAKRQAVT NPENTLYAIK RLIGRKFETE AVKKDIAISP FKIVKADNSD AWVEVRGQKY SPPEISAMVL QKMKKTAEDY LGEAVTDAVI TVPAYFDDSQ RQATKDAGKI AGLNVLRIIN EPTAAALAYG LDKKKDEKIA VFDLGGGTFD VSILELGEGV FEVKSTNGDT FLGGEDFDQK IIDHIADEFK KDQGIDLRGD KMALQRLKEA GEKAKCELST SLETDINLPF ITADASGPKH LTMKLTRAKL ESICAELIAK LEGPCRTALK DAGLSASDID EVILVGGMTR MPIVQKKVQD IFGKLPNRGV NPDEVVAIGA AIQGGVLRGD VKDVLLLDVT PLSLGIETLG GVLTKLIDKN STIPCRKSQV FSTAADNQPA VSIHVLQGER EMAADNKTLG NFELSGIPAA PRGVPQIEVT FDIDANGIVH VSAKDLGTGK EQSIRITASS GLSKEEVEKM VREAEAHAAD DKKKRELIEA KNQADNLIYQ TEKSLTEFGD KIDASEKQKI EEGVAALKKA LEGSDADEIK KASDSLMQAS HKLAEAVYAK TQGAGAEGGE QPHGEQEAGG AAKGEKVVDA DFEEVKDDKK
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