| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3502 |
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| Symbol | |
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| ID | 6780365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4012584 |
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| End bp | 4014689 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642769497 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_002140291 |
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| Protein GI | 197119864 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.114695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCTCCG ACAGGCACTC TTTCCTCAAG GCCCTCAGGC ACCTCATCCC CTTCGCCATC
CTTTTGGCTT TCAGCCTCTC TCTAGCCGCG CCCGCCGGGG CGCAGATCGC CACCTACCCG
CAGCTGCCGC ACGGCTACAG CTCGATCCGG GTCTTCGACA ACCAGCAGCG TTTCGTGGGG
CGGATCATGT CAAGCCAGCG CTACTGGGTC GGCATCGAGC GCATCCCGGT CTTCTTGAGA
AACGCGCTCA TCGCCACCGA GGACGCCCGC TTCTACCAGC ACCAGGGGAT CGACGTGCGC
GGCATCGCGC GCGCACTGGT AAAGGACGTG GTCAAGGGGA GGCTCGCCGA GGGGGGCTCG
ACCATCACCC AGCAGCTCAT CAAGAACAAG TACCTCTCCG GCGAGAAGTC GATCGACCGC
AAGGTCAAGG AGGTGCAGCT CGCCATCGAT TTCGAGAAGA AGTACACCAA GGACCAGATT
CTGGAGATGT ACTTCAACGA GATTTACTTC GGCAACGGGG CCTGGGGGGT TGCGCAGGCG
GCGCGCCTTT ATTTCGACAA GAACCCGGAG GAGCTGACCG AGGCGGAATG CTCCCTATTA
GCGGGGGTCC CGAAGAACCC GGGGCGCTAC AACCCGCTGG GGGATACGGC CAAGGTGAGC
GCGCGCCGCA GCACCGTATT GAAGCGGATG CTAGACGTCA AGATGATCAC TCCCGCGCAA
AAGCGCGCCA TCGAGGCGCA CCCTGCCACC GTGATCAAAT CGGGGCAGGC CCAGGGGTAC
CTCGACCTGG TGCGCCGGCA ACTGATGGAG CGCTACGGCG CGAAGGTCGT CGAGCAGGGG
GGTCTGGACG TGATCGCCGC GCTCGACCTC GACCTGCAAA AGCACGCGGA GAAGGTGCTG
CGCGAGGGGG TGAAGAAGGT GAACCCCAAC CTGCAGGGGG CCCTGTTGAG CCTCGACCTG
AAAACGGGCG ACGTCCTTGC CGCCGTCGGC GGGACCGACG GGAAGGTCGG TTTCAACCGC
GCCTTCTCGG CGAAAAGGCA GCCGGGCTCG GCCATCAAGC CGCTCATCTT CGCCGATGCG
CTGGAAAACG GCTTCACCGC GGGAAGCATC CTGGACGATC ACCCGGTCGC CTACAACCGC
GGCAACGGCC AAATCTGGAA GCCGCAGAAC TACGAGCGGA AGTCGTACGG CGAGCTGTCG
CTTCGGCAGG CGCTCGCGCA CTCGAACAAC GTGATCACCG TGAAGCTCCT CGACGCCATC
GGGGTCAACA ACTTCGTCGG CTTCGCGGGA AGCCTCGGGC TTTCCCTTCG CAACCCGAAC
GACCTCTCGC TTGCGCTTGG GACCGACGAG GTGACGCTGA ACGACCTGGT TTCCGCCTAT
ACCCCGCTTG CCAACGGAGG CTTCCGCTCC GAGGCGCGCA CCATCATCCG CGTCTTCGAC
CGCAGCCGCC GCGCCTGGAC CGAGAACCCG CCGGTGGTGG CGCCGGTCCT GCCGCCGGTC
ACCGCCTACG TGACCACCGA GATGATGAAG GACGTGCTGG AATACGGGAC CGCGAAGGGG
CTGAAGAAAT TCGCCTCGCA GCGACCCGCC GCCGGCAAGA CCGGTACCAC CGACGACTAT
CGCGATGCCT GGTTCGTAGG CTACACCCCC CAGATCATCA CCGGCGTCTG GGTCGGCTAC
GACAAGCCCA AGCCGGTCGG CAGAGGGTTC ACCGGCGGCG CCGTGTCCGC GCCGATCTGG
GAGCGTTTCA TGCGGCTGGC CACGGCCGGC AAACCCGCGG TCGACTTCCC CAAACCCGAT
GGCGTGGTCA GCGCCACCAT CGACCCGACC ACCGGGGAGC TTGCCACACC CAACTGCCCG
ACCACCAGGG AGGAGTTCTA CATCGTGGGG ACCGAGCCGA CCAAGTACTG CTCCAAGCAT
GGCGGCGACG ATATGGAGCA TGTGGCCCCG GAACCGCAGC CCCAGCCGGA GCAGCTGACC
CCGCCGGAGC AGCCTGAGCA GTTGACGCCG CCGGAGCAGC CGGTTGAGGC GACCCCGCCG
GAGGAGCCGA TACAGGAGCC CGGGGGGCAA CCTCAGGAGC CCGGCGAGAC CGCGCCCCAG
GAGTAG
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| Protein sequence | MLSDRHSFLK ALRHLIPFAI LLAFSLSLAA PAGAQIATYP QLPHGYSSIR VFDNQQRFVG
RIMSSQRYWV GIERIPVFLR NALIATEDAR FYQHQGIDVR GIARALVKDV VKGRLAEGGS
TITQQLIKNK YLSGEKSIDR KVKEVQLAID FEKKYTKDQI LEMYFNEIYF GNGAWGVAQA
ARLYFDKNPE ELTEAECSLL AGVPKNPGRY NPLGDTAKVS ARRSTVLKRM LDVKMITPAQ
KRAIEAHPAT VIKSGQAQGY LDLVRRQLME RYGAKVVEQG GLDVIAALDL DLQKHAEKVL
REGVKKVNPN LQGALLSLDL KTGDVLAAVG GTDGKVGFNR AFSAKRQPGS AIKPLIFADA
LENGFTAGSI LDDHPVAYNR GNGQIWKPQN YERKSYGELS LRQALAHSNN VITVKLLDAI
GVNNFVGFAG SLGLSLRNPN DLSLALGTDE VTLNDLVSAY TPLANGGFRS EARTIIRVFD
RSRRAWTENP PVVAPVLPPV TAYVTTEMMK DVLEYGTAKG LKKFASQRPA AGKTGTTDDY
RDAWFVGYTP QIITGVWVGY DKPKPVGRGF TGGAVSAPIW ERFMRLATAG KPAVDFPKPD
GVVSATIDPT TGELATPNCP TTREEFYIVG TEPTKYCSKH GGDDMEHVAP EPQPQPEQLT
PPEQPEQLTP PEQPVEATPP EEPIQEPGGQ PQEPGETAPQ E
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