Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3462 |
Symbol | |
ID | 6780324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3975447 |
End bp | 3976901 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642769456 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_002140251 |
Protein GI | 197119824 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTAAGAC TCGTGGTGGA TCATAGTGGC AAGGAGCGGC GCATAGGGGG GCTCTACCTC ATCACGGATC AAGCTGAGCG CCTGGTCCAC CGCGTGCGCG AGGCGCTCTC CTCGGGAGGG GTCGCCGTCC TGCAGTACCG GGACAAGGTC CGCAGCTACG AGGAACGCCT GGAACTGGGA CAGGAGCTGA AACACCTCTG CACGGAATTC CAGGTGGAAT TCATCGTCAA CGACGACGTC GAACTGGCCT TCGCCCTCGA CGCCGACGGC GTCCATCTGG GGCAGGACGA CGGCGACCCG GCCGCGGCAC GCGAGGCGCT CGGCCCCAAA AAGATGATCG GGATCTCGAC CCATTCGCTC ACGGAAGCGC TCGAGGCGCA GGAGGCCGGC GCCGACTACG TCGGCTTCGG AGCCATCTAC CCCACCGACA GCAAGGAGGT CGAGCATATC CAGGGGCCGG AGAAGCTCGT GCTTTTGAAG GAAAAGCTGA GGATACCGGT GGTCGCCATC GGCGGCATCA CCAGGGACAA CGCCTGCGCG GTGATCGACG CCGGAGCCGA CGCCATCGCG GTGATCTCGG CGGTGCTGTC GGCCAGATCC CCCGCGCTCG CCGCGACGGA ACTGGCGCTC CTCTTCAACA GGAAGGCGAT GCAGCCGCGC GGCGGCGTGC TCACCGTGGC CGGGAGCGAC TCGGGAGGGG GCGCCGGCAT CCAGGCGGAC CTGAAGACTG TGACGCTTTT GGGAAGCTAC GGCGCCTCTG CCGTCACCGC GCTTACCGCA CAGAACACCC GCGGCGTTAC CGCCATCCAT CCGGTCCCGG CCGCCTTCCT CGCGGAACAG ATCGACGCGG TCCTTACGGA CATCCCGATC GACGTGGTGA AGGTAGGGAT GCTCTCCTCG GCCGAGAACG CCGCCACCCT CGCCGACAGG CTCACCGACC ACGGCGTGAG GATGGTGGTG CTCGACCCGG TGATGAGCGC CAAGGGGGGG GTAGCGCTCA TGGAGGACGA GGCGCTAGGC GTCCTGAAAC AGAGGCTCAT CCCGCTTTGC TACCTGCTCA CGCCGAACAT CCCGGAGGCC GAGGCCCTCA CCGGGCTCAC CATCACCGAT ACGGCCGGCA TGGAACTAGC TGCTCGGGCT CTGCACCTCA TGGGGGCAAA GCACGTGCTG GTCAAGGGGG GGCACCTGAC CGAGGGGGTA GTCACCGACA TCCTCTTCGA CGGCGCCGGC TTCACCCGCT TCACGGCTCC GCGCGTACTC ACCCGCAACA CCCACGGCAC CGGCTGCACG CTGGCCTCGG CAATAGCAAG CTATCTAGCC CAGGGGGAAC CGCTCCCCGG CGCGGTGCTC CGGGCGAAGC TCTTCGTCAC CCGCGCCATC AAGTACGCCC AACCGCTGGG AAAGGGGCAC GGCCCCGTGA ACCATTTCAT GGCGGCAAGA GACCAGGCCG AATAA
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Protein sequence | MLRLVVDHSG KERRIGGLYL ITDQAERLVH RVREALSSGG VAVLQYRDKV RSYEERLELG QELKHLCTEF QVEFIVNDDV ELAFALDADG VHLGQDDGDP AAAREALGPK KMIGISTHSL TEALEAQEAG ADYVGFGAIY PTDSKEVEHI QGPEKLVLLK EKLRIPVVAI GGITRDNACA VIDAGADAIA VISAVLSARS PALAATELAL LFNRKAMQPR GGVLTVAGSD SGGGAGIQAD LKTVTLLGSY GASAVTALTA QNTRGVTAIH PVPAAFLAEQ IDAVLTDIPI DVVKVGMLSS AENAATLADR LTDHGVRMVV LDPVMSAKGG VALMEDEALG VLKQRLIPLC YLLTPNIPEA EALTGLTITD TAGMELAARA LHLMGAKHVL VKGGHLTEGV VTDILFDGAG FTRFTAPRVL TRNTHGTGCT LASAIASYLA QGEPLPGAVL RAKLFVTRAI KYAQPLGKGH GPVNHFMAAR DQAE
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