| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3454 |
|---|
| Symbol | |
|---|
| ID | 6780316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3965220 |
|---|
| End bp | 3966578 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642769448 |
|---|
| Product | ResB family protein |
|---|
| Protein accession | YP_002140243 |
|---|
| Protein GI | 197119816 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1333] ResB protein required for cytochrome c biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000344779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACAACGA ACAAACGTGG ATTTGCACAA GAGGTGTGGG ATTTTTTCTG TTCCTTAAAG
CTTTCAATTT TCCTGCTGAT TGGCTTGGCA CTGGTCTCGA TCATCGGTAC GGTGATACAG
CAGGGACCTC AACGCGAGTA TCTCGCCACT TTAAGCGAAA CTAAGATCAA GCTGTACAGT
TCCCTCGGCT TTTTTGACAT GTACCACTCC TGGTGGTTCA TCCTGCTTCT GTACCTCCTC
ACGCTGAACC TGATCTGCTG CTCCATCAAA AGGCTGCCGC GCGTCTGGAA AGTCGTCTCC
GAACCCGTCA AAGTGATGGA CGACAACTTC GAGAAGAGCC TCTCCAATGT GAAAGAGTTC
AAGCTCAAAG GTTCGAAGGA GGAGCTGAAG GACCGGATGG TCTCCTTCCT CAAAGCCGAA
TTCGCCGAGC CGGTGATAAC CGAGCAGGGA GGCGAATACC ACCTCTTCGC CCAGAAGCAC
CCGTGGTGCC GGCTTGGCGT CTACGTGGTG CATCTCTCCA TCATCATCGT CTTCATCGGA
GCGCTGATCG GCTCCTTCTT CGGATACAAG GCCTACGTCA ACATCCCGGA AGGCGGGTCC
GTGTCGCAGG TGCAGACCAA CAGCGGCAAG GTTATCGATC TCGGCTTCGA CGTGCGTTGC
GAGAAGTTCT CGGTCAGCTT CTACGACACC GGTGCTCCCA AGGAGTTCAA GAGCATCCTG
AGCGTGTCCG ACAAGGGGCA GCCTGTCGCT GGCCTGCAGC ACATTCCCAT CATCGTCAAC
GATCCGCTCA CCTACAAAGG GATCACCTTC TACCAGTCCA GCTACGGCCA GTCCGACGAG
GGGGTTGCCT ACTACATCTC GGTGCGCAAC CGCAACGGCG GCCAGCCGGT CAAGCTGAAG
GCGCGCCAGG GCGAGAGATT GGCACTGCCG GGCGGCGCCT TTGTCTCCGT CATGGAAGCG
ACCATGGACG TGCGTCCCTT CATGAGGGGC TTCGACGGTC CCGGCGCCCA GGTCGAGTAC
ACGCCGGCAG GCGGGAACCC GCAGCCGTTC GTCATCCTCT CCGACAAGTA CGAGTCGTTC
AACGCGCAGC ACGGCGGCGA CCTGATTCTG TCCTTCGACG GCATGGACCA GAAGTTCTTC
ACCGGCCTGC AGGTCGCCAA GGACCCCGGC GTCTGGGTGG TCTGGTTCGG CTGCTTCCTG
ATGGTGGTCG GTATCTGCAT GGCCTTCTTC ATGTCCCACA AGAGGGTCTG GGCCCGCGTT
ACCGATAAAG GCGTCACGCT GGGCGGTTCC GCCAGCAAGA ACCCCACCGG CTTCGAGATC
GCCTTCGACG AGCTGGTGGA AAAACTCAAC AAGTTATAG
|
|---|
| Protein sequence | MTTNKRGFAQ EVWDFFCSLK LSIFLLIGLA LVSIIGTVIQ QGPQREYLAT LSETKIKLYS
SLGFFDMYHS WWFILLLYLL TLNLICCSIK RLPRVWKVVS EPVKVMDDNF EKSLSNVKEF
KLKGSKEELK DRMVSFLKAE FAEPVITEQG GEYHLFAQKH PWCRLGVYVV HLSIIIVFIG
ALIGSFFGYK AYVNIPEGGS VSQVQTNSGK VIDLGFDVRC EKFSVSFYDT GAPKEFKSIL
SVSDKGQPVA GLQHIPIIVN DPLTYKGITF YQSSYGQSDE GVAYYISVRN RNGGQPVKLK
ARQGERLALP GGAFVSVMEA TMDVRPFMRG FDGPGAQVEY TPAGGNPQPF VILSDKYESF
NAQHGGDLIL SFDGMDQKFF TGLQVAKDPG VWVVWFGCFL MVVGICMAFF MSHKRVWARV
TDKGVTLGGS ASKNPTGFEI AFDELVEKLN KL
|
|---|
| |