Gene Gbem_3315 details

Gene Information

• Locus tag: Gbem_3315
• Symbol: ruvA
• ID: 6780173
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 3811654
• End bp: 3812253
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642769307
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_002140107
• Protein GI: 197119680
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGCGC TCCTTACCGG AAAGCTCGCC TACAAATCCC CCGAGTTCAT CATCCTGGAC 
GTCAACGGCG TGGGATACCA GGTGCACATC CCCTTCTCCA CCTACTACAC CCTCCCCGTC 
GAAGGGGGCG CGCTGTCGCT GCAGATCCAC ACCTCGGTGA AGGAAGACGC CATCAACCTG 
TACGGCTTCC GAACCCAGCA GGAGAAGGAA CTGTTCCAGC TCCTGATCGG CGTCTCAGGC 
GTGGGGCCGA AGCTCGCCAC CGGCATACTT TCCAACAGCG AGCCTTCCGA GCTTGCCGAT 
TCGCTCGTCA ACGGCAACCT GGCCCGGCTC TCCGCCATTC CCGGCATCGG CAAGAAAACA 
GCGGAGCGCC TGGTGCTGGA ACTTAAGGAA AAGATGAAGA AGCTGGGCCT CGCGCAGCCG 
CAGGCAGGCG GCACCACCGC TCCGGCCAAA CAGGAGATCA GGGACGACGT GCTCTCCGCG 
CTCATCAACC TGGGGTACAA GGAAGCCGTG GTGCAAAAGG CACTGGCAGA GTTGAAGGTC 
ACGGAAGACG CGACCGTCGA ACTCGTGCTC AAGCAGGCGC TGAAGATACT GATGAAGTAG 

 

Protein sequence

MIALLTGKLA YKSPEFIILD VNGVGYQVHI PFSTYYTLPV EGGALSLQIH TSVKEDAINL 
YGFRTQQEKE LFQLLIGVSG VGPKLATGIL SNSEPSELAD SLVNGNLARL SAIPGIGKKT 
AERLVLELKE KMKKLGLAQP QAGGTTAPAK QEIRDDVLSA LINLGYKEAV VQKALAELKV 
TEDATVELVL KQALKILMK