Gene Gbem_3264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3264 
Symbol 
ID6780122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp3756239 
End bp3756928 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content64% 
IMG OID642769257 
ProductABC transporter related protein 
Protein accessionYP_002140057 
Protein GI197119630 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAT CCACCCCTCC CATCGTCCGC ATCCGCAACC TTTCCAAGGG TTACCGCCGC 
GGCACCCAGG TCATCCCGGT TCTCACCGGC ATCAACGTCG ACATCGCCCA GGGAGAATTC 
GTCGCCCTCA TGGGTCCCTC CGGCTCGGGA AAAAGCACCC TCCTCAATCT CATCGCCGGC 
ATCGACACCG CCGATGAAGG CTCCATAACC ATCGGAGAGG TGGAGATCAC CCATCTGAGC 
GAGGGGGAAC TGGCCCGCTG GCGCGCCGGC AACGTCGGTT TCATCTTCCA GTTCTACAAC 
CTGATACCGG TCCTGACCGC CTTCGAGAAC GTGGAGCTTC CCCTTTTGCT CACCCCCCTG 
AAAAGGCGCG AGCGGCGCGA GCATGTCGAG GCGGTCCTCT CCGTGGTGGG GCTTGCCGAC 
CGGATGGATC ACTACCCCTC TCAGCTCTCC GGCGGCCAGC AGCAAAGAGT CGCCATCGCG 
CGCGCCATCG TCACCGACCC CGAGATCCTG GTGGCCGACG AGCCGACCGG GGACCTCGAC 
CGCGCCTCCG CCGAGGAGAT CCTGCAGCTC ATGGACCGCC TGGTCCACGA GTTCGGCAAG 
ACCGTCATCA TGGTCACCCA CGACCCGCGT GCCGCCGAAA AGGCCCACCT CATCAGGCAT 
CTCGAGAAGG GCGAGTTGAG CGTGAGCTAG
 
Protein sequence
MAESTPPIVR IRNLSKGYRR GTQVIPVLTG INVDIAQGEF VALMGPSGSG KSTLLNLIAG 
IDTADEGSIT IGEVEITHLS EGELARWRAG NVGFIFQFYN LIPVLTAFEN VELPLLLTPL 
KRRERREHVE AVLSVVGLAD RMDHYPSQLS GGQQQRVAIA RAIVTDPEIL VADEPTGDLD 
RASAEEILQL MDRLVHEFGK TVIMVTHDPR AAEKAHLIRH LEKGELSVS