| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3260 |
|---|
| Symbol | |
|---|
| ID | 6780118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3751589 |
|---|
| End bp | 3752668 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642769253 |
|---|
| Product | chorismate mutase |
|---|
| Protein accession | YP_002140053 |
|---|
| Protein GI | 197119626 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01801] chorismate mutase domain of gram positive AroA protein
[TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGAAA AGCAGACCCT GGAAAAACTC CGTCAGGAAA TAGATACCGT CGACGACCAT
ATCCTCGACC TTTTGAACCA GCGGGCCAAG CTGGTGATGG AGGTCGGCGC GGTCAAGGCC
AAAAGCCACA GCGATTTCCA CGTCCCCAGC CGGGAGAGGG AGATCTACGA ACGCCTCACC
GCGCAGAACC CGGGCCCCTT CCCGTCGGAC GCTGTGCGCG GCGTATTCCG CGAGATCATC
TCGGCTTCGC TCGCGCTGGA AAAACCCCTG AACGTCGCCT TCCTCGGACC GAGCGCCACC
TTCAGCCACC TGGCTGCCAT GCAGCACTTC GGCCTTTCGG CCTCGCTTTC CCCGGAGCGC
TCCATCCCCG CCGTCTTCGA GGCGGTGGAG AAGGGTGAGG CATACTACGG CGTGGTGCCG
GTGGAAAACA CCACCGAGGG GATGATCTCC CACACGCTGG ACATGTTCAT GGAGAGCGAG
CTGAAGATCA ACGCCGAGGT GCTCCTGGAG GTTTCCCACT TCCTCCTTTC CCGCACCGGG
CGCTTCGAGG ACATCAAAAA GGTCTACTCG CACCCGCAGC CCTTGGCCCA GTGCCGCAAG
TGGCTCGCCG AGAACCTCCC CAACGTGCCG CTGGTCGACG TCGCCTCCAC CACGCTCGCG
GCGCAGATCG TGTCCGAAGA CTACACCGCC GCGGCCATCG CCAGCGAATA CGCTTCCTCC
ATCTACAACC TCAAGGTGGT CAAGGCCCGC ATCGAGGACC AGGTCAACAA CTTCACCCGC
TTTTTGGTCA TCGGCCGCAA GATGGCCGAC AAAAGCGGAG ACGACAAGAC CTCGCTCATG
TTCTCGGTTC GCGACGAGCC CGGCATCCTG CACCGGATGC TGGAGCCTTT CGCCCAGCGC
GGCATCAACC TCTCCAAGAT CGAATCCCGC CCCCTGAAGC GCAAGGCCTG GGAATACATC
TTCTACCTCG ACCTGTCCGG CCACATCTCC GATCTGGAAG TCGCCGATGC GGTCAAGGAA
CTTTCCGTCT GCTGTCAATT CGTCAAGGTG CTGGGCTCCT ACCCCCGGGC GCGTTCATGA
|
|---|
| Protein sequence | MKEKQTLEKL RQEIDTVDDH ILDLLNQRAK LVMEVGAVKA KSHSDFHVPS REREIYERLT
AQNPGPFPSD AVRGVFREII SASLALEKPL NVAFLGPSAT FSHLAAMQHF GLSASLSPER
SIPAVFEAVE KGEAYYGVVP VENTTEGMIS HTLDMFMESE LKINAEVLLE VSHFLLSRTG
RFEDIKKVYS HPQPLAQCRK WLAENLPNVP LVDVASTTLA AQIVSEDYTA AAIASEYASS
IYNLKVVKAR IEDQVNNFTR FLVIGRKMAD KSGDDKTSLM FSVRDEPGIL HRMLEPFAQR
GINLSKIESR PLKRKAWEYI FYLDLSGHIS DLEVADAVKE LSVCCQFVKV LGSYPRARS
|
|---|
| |