| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3257 |
|---|
| Symbol | |
|---|
| ID | 6780115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3748714 |
|---|
| End bp | 3749415 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642769250 |
|---|
| Product | cytidylate kinase |
|---|
| Protein accession | YP_002140050 |
|---|
| Protein GI | 197119623 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0283] Cytidylate kinase |
|---|
| TIGRFAM ID | [TIGR00017] cytidylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0255416 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCAG TAAGGGAAAA CGGAGTAATC GTAGCCATAG ACGGCCCGTC CGGGGCCGGC
AAAAGCAGCC TCACCAAGCT CCTCGCCAAA CGTCTGGGGT ATATCCACAT CGACACCGGC
GCCATGTTCC GCGCCGTGGC CCTTTCGGCC CAGCGCGCCG GCATCAAGAG CGACGACGAC
GCGGGACTGG CCGAACTTTG CCGCGGCCTT GAGATCGCTT TTGCCCGCGA CGGCGAAACC
TGCCGGGTAC TCGCCAACGG CGAGGACGTA TCCACGAAGA TCAGGACCGA GGAGATCGGG
CTTTTGACCT CGACCATCTC GGCCAGGAAG CCGGTGCGCC AGGCGCTTTT GGAAATGCAG
CGCAAGATGG GGGCCAAGGG GGGCGTGATC CTGGAAGGTC GCGACATCGG CACCGTGGTT
TTTCCCGATG CCGAGGTGAA GTTCTTTCTC TCTGCCAGCG CCGAGGAGCG CGGCCGTCGC
CGTTACCTGG AACTTGCCGC CCGCGGCGAG AGCGCGACCC TCGAAGAGAC CATAGCCAAG
GTGATCCAGC GCGACCGGCA GGACGAGGGG CGCGAACACG CTCCACTTAA GCAGGCGCAA
GACGCCGTCC CCATCGATTC CACCAGCCTC ACCATCGAGC AGGTCCTGGA ACTGATGGAA
AGTACCGTGA AAGAGCGCCT GGCCCAAGGC GATAAGGGGT AA
|
|---|
| Protein sequence | MSAVRENGVI VAIDGPSGAG KSSLTKLLAK RLGYIHIDTG AMFRAVALSA QRAGIKSDDD
AGLAELCRGL EIAFARDGET CRVLANGEDV STKIRTEEIG LLTSTISARK PVRQALLEMQ
RKMGAKGGVI LEGRDIGTVV FPDAEVKFFL SASAEERGRR RYLELAARGE SATLEETIAK
VIQRDRQDEG REHAPLKQAQ DAVPIDSTSL TIEQVLELME STVKERLAQG DKG
|
|---|
| |