| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3255 |
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| Symbol | rpsA |
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| ID | 6780113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3746037 |
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| End bp | 3747791 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642769248 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002140048 |
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| Protein GI | 197119621 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000271492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGACG AAAAAAGGAC GTTCAAGAAA AAAGATATGC CTATCAGGCG GTTACACGAT
AATGACGAGG AGCTGGATCA GGCCGAAATG GGTGGCGAGT TTGCCGACCT TTTCCAGGAC
AGTCTGAGGC AGCCGCAGAG CGGCGAGGTA GTTAAGGCCG TCGTGGTCCA GATCGAGCAG
GACGTGGTGC TCGTGGACGT CGGTTACAAG TCCGAAGGCG CTATCCGCAT CGGCGAGTTC
ATCGACGAGA ACGGCGAACT CAACGTCAAG GTCGGTGACG AAGTAAACGT TTACTTCGAG
CGCGGCGAGA ACATCCGCGG CCACATGGTC CTCTCGAAGA AGAAAGCCGA TTCCCAGGTT
GCCTGGGAGA CCATCGCCGC AGCCGGCGAG GGTGGCGTTA TCGAAGGCAA GATCACCGGC
AAGGTGAAGG GCGGCATGAC CGTCGACGTC GGCGTCGAGG CATTCCTTCC GGCGTCCCAG
GTTGACCTCC GTCCCGGCGG CAACATGGAT CGCTTCGTCG GCCAGACCTA CCAGTTCAGG
ATCCTGAAAC TGAACAGGAA GCGCGGCAAC CTGGTTCTTT CCCGTCGCGT GCTGCTCGAA
GAAGAGCGCG ACAAGGCAAG GACCGAGACC CTGGCGACCC TGAAGGAAGG CGACATCGTC
AACGGCGTGG TCAAGAACAT CGCCGAGTAC GGCGCGTTCG TCGACCTGGG CGGTGTAGAC
GGCCTGCTGC ACGTAACCGA CATGTCCTGG GGCCGCCTCG GCCACCCCTC CGAGATGGTC
AAAGTGGGCG ACACCCTGAA CGTGATGGTT CTCAAGTACG ACCGCGAGAA AGGGAAGATC
TCCCTCGGCC TCAAGCAGAC CGTGCCCGAT CCCTGGCTCA ACGTCGGCGA TCGCTACAAG
GAAGGCGAGA GGGTGAGCGG CAAAGTCGTG AGCCTGACCG ACTACGGCGC GTTCATCTCC
CTGGAAGACG GCATCGAAGG TCTGGTGCAC GTTTCCGAAA TGTCCTGGAC CAGGAGGGTG
CGTCACCCGT CCGAGATCCT CAAGGTCGGA GAGGAAGTCG AAGCAGTCAT CCTGGGCGTC
GATCCGGGCA ACCGCAGGAT CTCCCTGGGG CTCAAGCAGA CCGAGATCAA CCCCTGGACC
GTGATCGGGG AGCGTTACCC GGTAGGCACC AAGATCGAAG GTCAGATCAA GAACATCACC
GACTTCGGCG TCTTCATCGG CATCGAAGAC GGCATCGACG GCCTGGTGCA TGTCTCCGAC
ATCTCCTGGA CCCGCCGCGT GAAGCACCCG GGCGAGATGT TCGCCAAAGG GCAGACCGTG
CAGGCAGTCG TTCTCAACAT CGACGTCGAG AACGAGCGTC TCTCCCTGGG CATCAAGCAG
CTGGCAGCCG ATCCGTGGGA AGAGATCCCC AGGAAGTACC GTCCGGGTTC CAAGGTCAAA
GGGCGCGTCA CCTCCGTGAC CGACTTCGGT ATCTTCGTCG AGATCGAAGA AGGGATCGAA
GGCCTGATCC ACGTTTCCGA GATCTCCTAC GAGAAGGTCG CCTCCCCGAA AGACTTCGCC
AACGTGGGCG ATGAGCTTGA GGCAGTAGTG CTGAACGTGG ACATGGTCGA GAAGAAGATC
GCCCTTTCCA TCAAGGCGCT GCAGACCGCC ATGGAGAAGG CAGAGATGGC CTCCTACATG
GGTAGCCAGG GTGAGGCCAC CTCCAGCTTC GGCGACCTGC TGAAAGAGAA GCTGAAGAAG
AACACCGAGG AATAG
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| Protein sequence | MGDEKRTFKK KDMPIRRLHD NDEELDQAEM GGEFADLFQD SLRQPQSGEV VKAVVVQIEQ
DVVLVDVGYK SEGAIRIGEF IDENGELNVK VGDEVNVYFE RGENIRGHMV LSKKKADSQV
AWETIAAAGE GGVIEGKITG KVKGGMTVDV GVEAFLPASQ VDLRPGGNMD RFVGQTYQFR
ILKLNRKRGN LVLSRRVLLE EERDKARTET LATLKEGDIV NGVVKNIAEY GAFVDLGGVD
GLLHVTDMSW GRLGHPSEMV KVGDTLNVMV LKYDREKGKI SLGLKQTVPD PWLNVGDRYK
EGERVSGKVV SLTDYGAFIS LEDGIEGLVH VSEMSWTRRV RHPSEILKVG EEVEAVILGV
DPGNRRISLG LKQTEINPWT VIGERYPVGT KIEGQIKNIT DFGVFIGIED GIDGLVHVSD
ISWTRRVKHP GEMFAKGQTV QAVVLNIDVE NERLSLGIKQ LAADPWEEIP RKYRPGSKVK
GRVTSVTDFG IFVEIEEGIE GLIHVSEISY EKVASPKDFA NVGDELEAVV LNVDMVEKKI
ALSIKALQTA MEKAEMASYM GSQGEATSSF GDLLKEKLKK NTEE
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