Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3225 |
Symbol | |
ID | 6780083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3712082 |
End bp | 3713401 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642769219 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_002140020 |
Protein GI | 197119593 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.891613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA AGAAGTTTTA CCAGCATCTG TACTTCCAGG TATTGACGGC GATATCTATC GGCGTAGCGG TCGGTTATTA CATGCCGGAC ACCGGTACCG CGATGAAGCC GCTGGGTGAC GGGTTCATCA AGATGATCAA AATGATCATC ACCCCCATCA TCTTCTGCAC CGTGGTCACC GGCATCGCCG GCATGGACGA CATGAAGAAG GTCGGCCGCG TTGGCGGCAA GGCGCTCCTC TACTTCGAGG CGGTCTCCAC TCTCGCGCTT GCCATCGGGC TCATGGTGAT CAACGTGATC CAGCCGGGAG TCGGCATGAA CGCCGATGTC ACCAAGCTGG ACACCAAGGG GCTCGCCACC TACACGGCTA CCGCCGCCAA GTCCCACAGC TTCGCCGATT TTGCGCTGGG GATCATCCCC AATAGCGTGG TCGACGCCTT CGCCAAGGGC GAAATCCTCC AGGTGCTCTT CTTTGCCATC CTGTTCGGCC TGGCGCTGTC CGCCATGGGC GAGAAGGGCA AGCCGGTGTA CCGCATGATC GACGATGTGG CTCACGCCTT CTTCGGCGTC GTGAACATCA TCATGAAGTT CGCTCCCATC GGCGCCTTCG GCGCCATGGC CTTCACCATC GGGAAGTTCG GCCTGGGCTC GCTGACCAAG CTCGGGATGC TGATGGGGAG CTTCTACCTG ACCTGCCTGC TCTTTATCTT CGTGGTGCTC GGGACCATCG GAAAGCTGTG CGGCTTCAAC ATCTTCAAGT TCATCTCCTA TATCAAGGAA GAGCTCCTCA TCGTGCTGGG GACCTCCTCT TCCGAATCCG CGCTTCCCCG CTTGATGGCG AAGCTGGAGA ACCTCGGCTG CTCCAAGTCC GTGGTCGGTC TGGTGATTCC CACCGGCTAT TCCTTCAACC TGGACGGCAC CTCCATCTAC CTCACCATGG CCGCGGTGTT CGTGGCGCAG GCGACCAACA CCCCGCTGGA TCTGACCCAG ACGCTGACCA TCCTGGGCGT GCTGATGCTT ACCTCGAAAG GGGCCGCAGG CGTCACCGGC AGCGGTTTCG TCACCCTGGC AGCAACCTTT GCCGCCATCC CCACCATCCC GGTTGCGGGG CTTGCCCTCA TCCTCGGGAT CGACCGCTTC ATGTCCGAGG CGCGTGCCCT CACCAACCTG GTCGGCAACG GCGTCGCTAC CGTGGTCGTC TCCCGCTGGG AAAACGAGCT GAACGCGACC CGCATGTCGC AGGTGCTGAA CAAGGAATTG GATGAGGCTG CCGTGGAGGC TGACCTGCTG ATGATGGACC CCGAGCCCGA AGAAGCTTAG
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Protein sequence | MKTKKFYQHL YFQVLTAISI GVAVGYYMPD TGTAMKPLGD GFIKMIKMII TPIIFCTVVT GIAGMDDMKK VGRVGGKALL YFEAVSTLAL AIGLMVINVI QPGVGMNADV TKLDTKGLAT YTATAAKSHS FADFALGIIP NSVVDAFAKG EILQVLFFAI LFGLALSAMG EKGKPVYRMI DDVAHAFFGV VNIIMKFAPI GAFGAMAFTI GKFGLGSLTK LGMLMGSFYL TCLLFIFVVL GTIGKLCGFN IFKFISYIKE ELLIVLGTSS SESALPRLMA KLENLGCSKS VVGLVIPTGY SFNLDGTSIY LTMAAVFVAQ ATNTPLDLTQ TLTILGVLML TSKGAAGVTG SGFVTLAATF AAIPTIPVAG LALILGIDRF MSEARALTNL VGNGVATVVV SRWENELNAT RMSQVLNKEL DEAAVEADLL MMDPEPEEA
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