Gene Gbem_3225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3225 
Symbol 
ID6780083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3712082 
End bp3713401 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content61% 
IMG OID642769219 
Productsodium:dicarboxylate symporter 
Protein accessionYP_002140020 
Protein GI197119593 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.891613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA AGAAGTTTTA CCAGCATCTG TACTTCCAGG TATTGACGGC GATATCTATC 
GGCGTAGCGG TCGGTTATTA CATGCCGGAC ACCGGTACCG CGATGAAGCC GCTGGGTGAC
GGGTTCATCA AGATGATCAA AATGATCATC ACCCCCATCA TCTTCTGCAC CGTGGTCACC
GGCATCGCCG GCATGGACGA CATGAAGAAG GTCGGCCGCG TTGGCGGCAA GGCGCTCCTC
TACTTCGAGG CGGTCTCCAC TCTCGCGCTT GCCATCGGGC TCATGGTGAT CAACGTGATC
CAGCCGGGAG TCGGCATGAA CGCCGATGTC ACCAAGCTGG ACACCAAGGG GCTCGCCACC
TACACGGCTA CCGCCGCCAA GTCCCACAGC TTCGCCGATT TTGCGCTGGG GATCATCCCC
AATAGCGTGG TCGACGCCTT CGCCAAGGGC GAAATCCTCC AGGTGCTCTT CTTTGCCATC
CTGTTCGGCC TGGCGCTGTC CGCCATGGGC GAGAAGGGCA AGCCGGTGTA CCGCATGATC
GACGATGTGG CTCACGCCTT CTTCGGCGTC GTGAACATCA TCATGAAGTT CGCTCCCATC
GGCGCCTTCG GCGCCATGGC CTTCACCATC GGGAAGTTCG GCCTGGGCTC GCTGACCAAG
CTCGGGATGC TGATGGGGAG CTTCTACCTG ACCTGCCTGC TCTTTATCTT CGTGGTGCTC
GGGACCATCG GAAAGCTGTG CGGCTTCAAC ATCTTCAAGT TCATCTCCTA TATCAAGGAA
GAGCTCCTCA TCGTGCTGGG GACCTCCTCT TCCGAATCCG CGCTTCCCCG CTTGATGGCG
AAGCTGGAGA ACCTCGGCTG CTCCAAGTCC GTGGTCGGTC TGGTGATTCC CACCGGCTAT
TCCTTCAACC TGGACGGCAC CTCCATCTAC CTCACCATGG CCGCGGTGTT CGTGGCGCAG
GCGACCAACA CCCCGCTGGA TCTGACCCAG ACGCTGACCA TCCTGGGCGT GCTGATGCTT
ACCTCGAAAG GGGCCGCAGG CGTCACCGGC AGCGGTTTCG TCACCCTGGC AGCAACCTTT
GCCGCCATCC CCACCATCCC GGTTGCGGGG CTTGCCCTCA TCCTCGGGAT CGACCGCTTC
ATGTCCGAGG CGCGTGCCCT CACCAACCTG GTCGGCAACG GCGTCGCTAC CGTGGTCGTC
TCCCGCTGGG AAAACGAGCT GAACGCGACC CGCATGTCGC AGGTGCTGAA CAAGGAATTG
GATGAGGCTG CCGTGGAGGC TGACCTGCTG ATGATGGACC CCGAGCCCGA AGAAGCTTAG
 
Protein sequence
MKTKKFYQHL YFQVLTAISI GVAVGYYMPD TGTAMKPLGD GFIKMIKMII TPIIFCTVVT 
GIAGMDDMKK VGRVGGKALL YFEAVSTLAL AIGLMVINVI QPGVGMNADV TKLDTKGLAT
YTATAAKSHS FADFALGIIP NSVVDAFAKG EILQVLFFAI LFGLALSAMG EKGKPVYRMI
DDVAHAFFGV VNIIMKFAPI GAFGAMAFTI GKFGLGSLTK LGMLMGSFYL TCLLFIFVVL
GTIGKLCGFN IFKFISYIKE ELLIVLGTSS SESALPRLMA KLENLGCSKS VVGLVIPTGY
SFNLDGTSIY LTMAAVFVAQ ATNTPLDLTQ TLTILGVLML TSKGAAGVTG SGFVTLAATF
AAIPTIPVAG LALILGIDRF MSEARALTNL VGNGVATVVV SRWENELNAT RMSQVLNKEL
DEAAVEADLL MMDPEPEEA