Gene Gbem_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3204 
Symbol 
ID6780062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp3694491 
End bp3695168 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID642769198 
Productthymidylate kinase 
Protein accessionYP_002139999 
Protein GI197119572 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00156948 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTTTT TCATTACATT TGAAGGTATA GAAGGGTGCG GCAAGACCAC CCAGCTGAGG 
CTTTTGAAGG AGCGTCTGGA AGCTGCGGGC GAGAAGGTGA CCGTGACCCG GGAGCCTGGA 
GGGTGCCCGG TCGCCGACCA GATGCGCGCC ATCCTGCTGG ATGCCAAAAA CAGCGCCATC 
ACCCCTTTGG CTGAACTCCT TTTGTACGCG GCGGCCCGGG CGCAGCACGT GCAGGAAGTC 
ATCGTCCCAG CGCTTGAGCG TGGCGAGACG GTCCTTTGCG ACCGCTTTAC CGACGCGACC 
GTCGCCTACC AGGGGCACGG CAGGGGTCTC GACCTCACCG TCATCGAAGA ACTCAACACC 
CTTGCCACCG GGAGGGTGCA GCCGGCGCTC ACCGTGCTCA TCGACTGCCC GGTGGAAGTG 
GGACTTTCCC GCGCCCTGGC CCGGATCGAG GCGACCAGCG GGGCGAAGGA AGAACGTTTC 
GAGCGCGAGT CCCTGCTCTT CCACCAAAAG GTACGCAACG GCTACCTGAC GCTGGCGGCC 
GCTTTCCCGG AACGCTTCGT GGTTGTCGAC GGCTCGGGAG ACGTGCGGCA GACCGGGCTC 
CTCGTCGCAG AGGCCCTTCG CCAGAGGATG CAGAGCCTTG GCAAGGCCGG ACTCGCAGCA 
GTCAAGGCAG GGTGCTAG
 
Protein sequence
MGFFITFEGI EGCGKTTQLR LLKERLEAAG EKVTVTREPG GCPVADQMRA ILLDAKNSAI 
TPLAELLLYA AARAQHVQEV IVPALERGET VLCDRFTDAT VAYQGHGRGL DLTVIEELNT 
LATGRVQPAL TVLIDCPVEV GLSRALARIE ATSGAKEERF ERESLLFHQK VRNGYLTLAA 
AFPERFVVVD GSGDVRQTGL LVAEALRQRM QSLGKAGLAA VKAGC