| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3139 |
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| Symbol | |
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| ID | 6779998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3623878 |
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| End bp | 3624984 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642769136 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_002139937 |
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| Protein GI | 197119510 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAG AGATGTTCTG CGAGGGGGTA ACCCGGAGGA GTTTCATGAA GACCTGCGTC
ACCGCGACGG CCATGATGGG GCTTCCCTTC GCCATGCACA CGCAGGTTGC CGAGGCGATC
GAGAAAAACG GCAACCCCGC GGTGATCTGG CTCCATTTCC AGGAGTGCAC CGGCTGTTCC
GAGTCGCTTC TGCGTTCGAG CCATCCGACC ATTTCCACGC TGATCCTGGA CATGATTTCG
CTGGACTATC ACGAGACGCT GATGGTAGGT GCCGGGCACC AGGCCGAGAA GTCGCTGCAC
GACTCGATGA AGGCGAACCA GGGGAAGTAC ATTCTGGTGG TCGAGGGGGC GATCCCGACC
AAGCAGAACG GGATCTTCTG CAAGGTTTCC GGCAAGACCG CCATGGAGTC GCTGCAGGAA
GCGGCCAAAG GGGCTGCCGC CATCATCAGC ATCGGGACCT GCGCCTCCTA CGGCGGCATC
CAGTCCGTGG CCCCGAACCC CACCGGCGCC GTAGGGGTCA GGGACATCGT GAAGGACAAG
CCGATCATCA ACATCCCGGG CTGCCCTCCC AACCCTTACA ACTTCCTTTC CACCGTCCTC
TACTACCTGA CCTTCAAGAA GCTTCCCGAA CTTGACAACC TGGGGCGCCC GAAGTTCGCC
TACGGCAGGA AGATCCACGA GCATTGCGAA AGGCGTCCGC ACTTCGACGC CGGCCGCTTC
GCCAAGGCCT ACGGCGACCC GACCCATGCC CAGGGGTACT GCCTCTATAA GCTGGGGTGC
AAGGGACCCG CGACCAGCGC CAACTGCTCC GTGCAGCGCT TCAACGACGT GGGGGCGTGG
CCGGTCTCCA TCGGTCACCC CTGCATCGGC TGCACGGAAC CGGACATACT CTTCAAGACG
GCGATCGCCG AGAAGGTGCA GATCCACGAG CCCACCCCGT TCGACAGCTA CGCGCCGGTC
GACCTGAAAG AAAAGGGTAA GGGGCCCGAC CCGCTCACCA CGGGCTTCGT GGGCCTTGCC
GCCGGCGCGG CACTTGGCGC AGGCGCCATG CTCGCCAAGA AGCTTCCGGG CAACACGCAG
GAGGGCGGCG ATGAAAAATC CGAGTAG
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| Protein sequence | MKEEMFCEGV TRRSFMKTCV TATAMMGLPF AMHTQVAEAI EKNGNPAVIW LHFQECTGCS
ESLLRSSHPT ISTLILDMIS LDYHETLMVG AGHQAEKSLH DSMKANQGKY ILVVEGAIPT
KQNGIFCKVS GKTAMESLQE AAKGAAAIIS IGTCASYGGI QSVAPNPTGA VGVRDIVKDK
PIINIPGCPP NPYNFLSTVL YYLTFKKLPE LDNLGRPKFA YGRKIHEHCE RRPHFDAGRF
AKAYGDPTHA QGYCLYKLGC KGPATSANCS VQRFNDVGAW PVSIGHPCIG CTEPDILFKT
AIAEKVQIHE PTPFDSYAPV DLKEKGKGPD PLTTGFVGLA AGAALGAGAM LAKKLPGNTQ
EGGDEKSE
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