| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3136 |
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| Symbol | |
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| ID | 6779995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3619909 |
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| End bp | 3621588 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642769133 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_002139934 |
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| Protein GI | 197119507 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAGAA TCACGCTTGA TCCCATCACC CGCATCGAAG GGCACCTCAG GATAGACGTC
GAAGCCAACG GCGGCAAGGT TACCAACGCC TGGTCCTCGG CCCAGATGTG GCGCGGCATC
GAGGTCATCC TCAAGGGGCG CGCCCCCGAG GACGCCTGGA GCTTCGTGCA GCGCTTTTGC
GGCGTCTGCA CCACGGTGCA CGCCATCTCC TCGATCCGCG CCGTAGAGCA CGCCCTGAAC
GTCGAGGTGC CGCTCAACGC CCAGTACATC CGCAACATCA TGATCGCCCA GCATTCGGTG
CAGGACCACA TCGTCCACTT CTACCACCTC TCGGCGCTGG ACTGGGTCGA CATCGTCTCG
GCGCTCAAGG CCGATCCCAA GAAGACCGCG CAGATAGCCC AGAGCATCTC CGACTGGCCG
GGTAACTCGG AGAAGGAGTT CAAGGCGGTC CAGGACAAGC TGAAGGCGTT CGTCGCCGGC
GGCAAGCTTG GCATTTTCGC CTCCGGCTAC TGGGGGCATC CGGCCATGAA GCTCTCTCCC
GAGGTGAACC TGATGGCGGT GGCTCACTAC CTGAAGGCGC TCGACTACCA GAGAAAGGCG
TCCCAGGCGA CCGCCATCCT GGGGGGGAAG AACCCGCATA TCCAGAACCT CGTGGTCGGC
GGCGTCGCCA CCGCGATCAA CACCGAGAAC ATAGCCACCC TCAACATGGA GCGCCTCATC
TACCTGAGGA CCCTGATGGA GGAGACCCGC GACTTCGTGC AGAAGGTGTA CTACCCGGAC
CTCCTCGCCA TCGCCGGCGC CTACAAGGAT TGGTTCAAGT ACGGGGCAGG GGTCACCAAT
TACATGGCGG TCCCCGAGTT CCCGGAAGAC ACCAAAAACG GCAAGTTCTC GCTCCCGGGC
GGCGTGGTCA TGGCGGGGAA CATCGCCGGC ATCAGGCCGG TCAAGGACCA TCGCGACGAA
TACCTGATCA AGAACATCAA GGAAAACGTC ACCCACGCTT GGTACGAGGG GAACGGCACG
CTGCACCCCT GGGAAGGGGA GACCAAGCCC GACTACACCG ACTTCAAGGA AAACGGAAAG
TACTCCTGGT GCAAGGCGCC GACCCTGGAC GGAAAGCCGG TGCAGGTAGG TCCTCCGGCC
CAGATCATGG CCGCCTACGC CGCAGGAAAC CCGAAGGTGA AAAAGCTCGT CGACGGCGCC
GTCTCCACCC TCGGCCTCTC GATGAAGGAC ATCCACTCCA CCATGGGGCG CCTGTACTGC
CGCGGCGCGC GCGCCCACAT CATGGCCGAC ATCGCGCTGG AAAACCTGGA CAAGCTGATC
GCCAACATCG CCACCGGCGA CCAAACCTAC GCGAACCACA CCGAGATCCC CAAAGGGGAG
TATCGCGGGG TGGGCTTCCA CGAGGCGCCG CGCGGCACCC TGAGCCACTG GATCGTCATC
AAGGACAAGA AGATCGAGAA CTACCAGGCC GTCGTTCCCT CCACCTGGAA CGCCGCTCCC
AGAAATGACA AGGGAGAACT CGGCCCCTAC GAGGCGTCGC TCGTCGGGAA CCCCATCGCC
GACAGCAGCA AGCCGCTGGA GGTCTTGAGG ACCATCCACT CCTTCGACCC CTGCATCGCC
TGCGCCGTGC ACACGGTCGA CCCCGAAGGA AAGGAAATCA CCAAGGTGAA AGTGCTGTAA
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| Protein sequence | MSRITLDPIT RIEGHLRIDV EANGGKVTNA WSSAQMWRGI EVILKGRAPE DAWSFVQRFC
GVCTTVHAIS SIRAVEHALN VEVPLNAQYI RNIMIAQHSV QDHIVHFYHL SALDWVDIVS
ALKADPKKTA QIAQSISDWP GNSEKEFKAV QDKLKAFVAG GKLGIFASGY WGHPAMKLSP
EVNLMAVAHY LKALDYQRKA SQATAILGGK NPHIQNLVVG GVATAINTEN IATLNMERLI
YLRTLMEETR DFVQKVYYPD LLAIAGAYKD WFKYGAGVTN YMAVPEFPED TKNGKFSLPG
GVVMAGNIAG IRPVKDHRDE YLIKNIKENV THAWYEGNGT LHPWEGETKP DYTDFKENGK
YSWCKAPTLD GKPVQVGPPA QIMAAYAAGN PKVKKLVDGA VSTLGLSMKD IHSTMGRLYC
RGARAHIMAD IALENLDKLI ANIATGDQTY ANHTEIPKGE YRGVGFHEAP RGTLSHWIVI
KDKKIENYQA VVPSTWNAAP RNDKGELGPY EASLVGNPIA DSSKPLEVLR TIHSFDPCIA
CAVHTVDPEG KEITKVKVL
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