| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3112 |
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| Symbol | |
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| ID | 6779971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3598630 |
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| End bp | 3599511 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642769109 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_002139910 |
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| Protein GI | 197119483 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG GATGCATGTT CTATGGCTCC TTGTTTATAG CAGGGGTGTT GCTTCTTTTC
CTTTTCTGTG TCGGCGTCGT CAAAGTGTTA TTGAACGACG GGGATAGCTT GAAGGGCGAC
GGGGTCGGCC TGGTCGAACT GAAGGGGCTG ATCGTCGACG GGCAGGAGAC GGTGCGGCAG
CTGCGCGAGC TGAAAAAGGA CGAGCGGGTG AAGGCGGTGG TTTTGCGCAT CGACTCGCCG
GGCGGTGTCG TCGGCCCCTC CCAGGAGATC TACGCTGCCG TGAAGGGGGT GGCGAAGGTG
AAGAAGGTGG TGGTCTCCAT GGGGAGCGTC GCCGCTTCGG GTGGATACTA CGCGGCTGCG
CCGGCTACCC TCATCTACGC CAACCCCGGC ACCATCACCG GGAGCATTGG CGTCCTGATG
AAGTTCTCCA ACATCGAGGG GCTGATGGAC AAGGTGGGGC TGAAGGCCTT CACCATCAAG
ACCGGCAAGT TCAAGGACGT AGGCTCCCCG GTCCGCACCA TGAGCGACGA GGAGAGGGGG
ATGCTGCAGG GGGTGATCGA CAGCACGCAC CAGCAGTTTA TAAAGGCGGT CGCCGAGGGA
AGGAAGCTTC CGGTCGAACA GGTGCGCGCC ATCGCCGACG GCAGGATCTT TTCCGGAGAG
CAGGCGCTGG CTGCAAAGCT CGTGGACCGG ATCGGCACCC TGCAGGACGC AGTCGAGGAA
GCCGGGCGGC TGGGGGGTAT CAAGGGTGAG CCCGAGCTGA TAAGTCCTCC CAGGAAGAAG
AGCAGGATTT TCGGCGCTCT GAGTGAGCGG GCCGAGCAGC AACTGGAACA GTTTTCCGGC
TCAGACAGTG GCGTCAGTCT CGACTACAAG TTGGGTTGGT AA
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| Protein sequence | MKKGCMFYGS LFIAGVLLLF LFCVGVVKVL LNDGDSLKGD GVGLVELKGL IVDGQETVRQ
LRELKKDERV KAVVLRIDSP GGVVGPSQEI YAAVKGVAKV KKVVVSMGSV AASGGYYAAA
PATLIYANPG TITGSIGVLM KFSNIEGLMD KVGLKAFTIK TGKFKDVGSP VRTMSDEERG
MLQGVIDSTH QQFIKAVAEG RKLPVEQVRA IADGRIFSGE QALAAKLVDR IGTLQDAVEE
AGRLGGIKGE PELISPPRKK SRIFGALSER AEQQLEQFSG SDSGVSLDYK LGW
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