Gene Gbem_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3092 
Symbol 
ID6779951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3577261 
End bp3580731 
Gene Length3471 bp 
Protein Length1156 aa 
Translation table11 
GC content62% 
IMG OID642769089 
ProductDNA polymerase III, alpha subunit 
Protein accessionYP_002139890 
Protein GI197119463 
COG category[L] Replication, recombination and repair 
COG ID[COG0587] DNA polymerase III, alpha subunit 
TIGRFAM ID[TIGR00594] DNA-directed DNA polymerase III (polc) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00110918 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCAA CAAATTTCGT TCACCTCCAT CTCCACTCCC AGTACTCGCT CCTCGACGGG 
GCGATCCGCA TCGGTGACCT CCTGAAGAAG GTGAAGGAGT GCCACATGCC GGCCGTGGCC
ATGACCGACC ACGGCAACAT GTTCGGCACC CTTGAGTTCT ATTTGAAGTG CAAGGACAAA
GGGGTCAAGC CGATCCTGGG GAGCGAGGTG TACATAGCGC CTCAGGACAG GTTCTTGAAG
CAGGCTCCCT CCAGCCCCGG CCAGGCCTCC AGCTACCACC TGATCCTTTT GTGCGAAAAC
ATGACCGGCT TCAAGAACCT CTCCTATCTG GTATCCGCAG GATACAAGGA AGGGTTCTAC
CGCCGCCCCC GCATCGACAA GGAGCTCCTT CTGAAGCACA AGGAGGGGCT CATCGTCCTC
TCCGCCTGCC TGCAGGGGGA GGTGGCGTAC CTTGCCGGCA GGAACAAGAT GGACGAGGCG
CGCGCAGCGG CCTCCTGGTA CGCCGAGAAT TTCCCCGGTA GCTATTACAT CGAGCTGCAG
GAGAACAAGC TCCCGGAGCA GGACATCGCC AACCGCAGGC TCATGGAGAT CGCGCGTGAG
ATGGACCTGC CGCTCGTCGC CACCAACGAC TGCCATTACC TGAACCGCGA AGACGCGAGG
GCCCACGAGA TCCTCCTCTG CATCCAGACC GGCAAGACCA TGAGCGACCC GACCCACATG
GCGTTCTCCG TGGACGAGTT CTATGTGAAG ACGCCGCAGG AGATGGCGCA GGCGTTTCAT
TACGCCCCGG AGGCGATTGA GAACACGGTC AAGATCGCCG AGCGCTGCAA CCTCGAATTC
GACTTCAAGA CCTACTACTT CCCCGCCTAC GAGGCCCCTG AAGGGGAGAC GCTGGACCAG
CAGCTGGAGC GCGAGGCGAC CGTCGGCCTC GTCGAGCGGC TGAAAAAGAT CCGCATCAAG
TACAACTTGA CCGAAGAGCA GGAACAGGCC TACCACGCCC GTCTGCGCAT CGAGCTGGAC
TGCATCAAGC AGATGGGGTT CCCGGGCTAC TTCCTGATCG TCGCCGACTT CATCAACTGG
GCCAAAGACC ACGGCATCCC CGTCGGCCCG GGCAGGGGTT CCGCGGCGGG CTCTCTCGTC
GCCTTCTGCA TCAGGATCAC CGACATCGAT CCCATGCCGT ACAACCTCCT CTTCGAGCGC
TTCCTGAACC CGGAACGTAT CTCCATGCCT GATATCGACG TCGACTTCTG CCAGGATCGC
CGCGAAGAGG TGATCCAGTA CATGGTCGAG AAGTACGGCC GGGAGAAGGT CTGCCAGATC
ATCACCTTCG GTACCATGGC GGCGCGCGGC GTCATCCGCG ACGTCGGGCG CGCGCTCGAC
CTTACCTTCG GCGAGGTGGA CCGGATCGCG AAGCTGGTCC CCGAGGTGCT CGGCATCACG
CTGGATAAGG CGCTGGAGCA GGAGCCGAAG CTGAAGGAGC TGATGGCGGC CGACCCGAAG
GTGAAGGAGG TCATGACCGT CGCGCTCAGG CTGGAGGGGC TTGCCCGCCA TGCCTCTACG
CATGCGGCCG GCCTCGTGGT GGCACCCAGG CAGATGGAGG AATTCTGCCC GGTCTACAAG
GACCAGAAGA CCGGCTCCTT GACCACGCAG TACTCGATGA AGTACGTGGA GAAGATCGGC
CTGGTGAAGT TCGACTTCCT CGGGCTCAAG AACCTGACCG TTATCGACAA CGCCTGCAAG
CACATCAGAA ACGGCAAGGA CCCCAACTTC GACATCACGC TTTTGCGCGA CGACGACGAG
GAATCCTACA AGCTCCTGCA GGCCGGCAAC ACGACAGGCG TGTTCCAGCT GGAGTCCAGC
GGCATGAAGG AGCTCCTGGT CAAGTTGAAG CCCTCCTGCT TCGAGGACAT CATCGCGGTC
TGCGCCCTCT ACCGTCCGGG CCCCTTGGGC AGCGGCATGG TGGACGACTT CATCGAAAGA
AAGCACGGCC GCAAGCAGAC CGTCTACGAC CTGCCGCAGC TTGAGCCGGT CCTGAAAGAC
ACCTACGGCG TCATCGTCTA CCAGGAACAG GTCATGCAGA TCTCCCGATC GCTCGCCGGC
TACTCGCTTG GGGGCGCGGA CCTCCTGCGC CGCGCCATGG GTAAGAAGGA CGCCGAGCAG
ATGGCGAAGG AGCGCGACAA GTTCCTGGAG GGGTCCGAGA AGCTCGGCCT GGACGGGAAG
AAGTGCGCCG CCATCTTCGA CCTGATGGCG AAGTTCGCCG AGTACGGCTT CAACAAGTCG
CACTCGGCCG CCTACGCCCT GGTCGCCTAC CAGACCGCGT TCCTCAAGGC CCACTACCCG
GTCGAGTTCA TGGCTGCCCT CTTGACCGAG GACATGGGGA ACACCGACAA GGTCATTAAG
AGCATCGGCG ACTGCCGCGA GATGGGGATC GAGGTGCTCC CCCCCGACAT CAACGAGTCG
GACCGTTCCT TCCGCGTGCT GGACAAGGCG ATGCGCTTCG GTCTGGGCGC CGTGAAGAAC
GTGGGCGAAG GCGCCATCGA GGCGATCATC GAGGCGCGCG GCGACGAGCC TTTCAAGGAC
CTCTTCGATT TCTGCGAGCG CGTCGACCTG CGCCGGGTCA ACAAAAGGGT GATAGAGGCG
CTCATCAAGT GCGGCGCCTT CGACTGCACC GGGGCCAAAC GCTCCCAGCT CATGGCGGGG
CTGGAGGATG CCGCGTCCGC CGGGCAGAGG GTGCAGCAGG AGCGAGAGAG CGCTCAGGCG
TCGCTTTTCG GCGCGGCCGA GATCGTGCGC GGCGCCAACG GCGGCGGCAA CCGGCTTCCC
GAGATACCCG AGTGGGACGA GAAGTACCGG CTGGGGTGCG AGAAGGAGGC GATCGGCTTC
TTCATCACCG GGCATCCGCT GGACCGCTAC GTCGCCGACA TGAGGCGCTT CTCCAGCGTG
GACTGCTCCA CCATCCTGGA CGCCAAGGAA AAGAGCGAGG TGAGGATATG CGGCGTGCCG
GCCAGCGTCA AGGAGCTGAT CACCAAGAAA GGGGACCGGA TGGCCTTCCT CGCGCTGGAG
GACCTGGTGG GCTCGGTCGA GGTGGTGGTC TTTCCGGAAA CCTACGCCAA GTGCTCCGAG
GTGCTCAGGG GGGACGATCC CATCCACGTC ACCGGCACCG TTGAGCTGAG TGAGAAGGGG
GCCAAGGTGA TGGCGAGCGA CATCGTCCTT CTGCGCGACC TGGTTGAGCG TGAAACGAGG
AAGGTCAATT TCACCATAGA CGCCAAAGAG GTCGACGAAG GAAAGCTCAA AACGCTCAAA
GACATCATCT CCCGCTATCA GGGAATCTGT CGCAGCTTCC TGCACCTTGA CATAGAGAAC
AGCTCCAGAG TCACCATCAA GCTTCCCGAT GTATACAAAG TCTCGGCAAG TGAAGAATTA
ACAGTGGAAG TGAGCAACCT CTTCGGCTAT AATGCCGTGT CTTTCGAGTG A
 
Protein sequence
MDSTNFVHLH LHSQYSLLDG AIRIGDLLKK VKECHMPAVA MTDHGNMFGT LEFYLKCKDK 
GVKPILGSEV YIAPQDRFLK QAPSSPGQAS SYHLILLCEN MTGFKNLSYL VSAGYKEGFY
RRPRIDKELL LKHKEGLIVL SACLQGEVAY LAGRNKMDEA RAAASWYAEN FPGSYYIELQ
ENKLPEQDIA NRRLMEIARE MDLPLVATND CHYLNREDAR AHEILLCIQT GKTMSDPTHM
AFSVDEFYVK TPQEMAQAFH YAPEAIENTV KIAERCNLEF DFKTYYFPAY EAPEGETLDQ
QLEREATVGL VERLKKIRIK YNLTEEQEQA YHARLRIELD CIKQMGFPGY FLIVADFINW
AKDHGIPVGP GRGSAAGSLV AFCIRITDID PMPYNLLFER FLNPERISMP DIDVDFCQDR
REEVIQYMVE KYGREKVCQI ITFGTMAARG VIRDVGRALD LTFGEVDRIA KLVPEVLGIT
LDKALEQEPK LKELMAADPK VKEVMTVALR LEGLARHAST HAAGLVVAPR QMEEFCPVYK
DQKTGSLTTQ YSMKYVEKIG LVKFDFLGLK NLTVIDNACK HIRNGKDPNF DITLLRDDDE
ESYKLLQAGN TTGVFQLESS GMKELLVKLK PSCFEDIIAV CALYRPGPLG SGMVDDFIER
KHGRKQTVYD LPQLEPVLKD TYGVIVYQEQ VMQISRSLAG YSLGGADLLR RAMGKKDAEQ
MAKERDKFLE GSEKLGLDGK KCAAIFDLMA KFAEYGFNKS HSAAYALVAY QTAFLKAHYP
VEFMAALLTE DMGNTDKVIK SIGDCREMGI EVLPPDINES DRSFRVLDKA MRFGLGAVKN
VGEGAIEAII EARGDEPFKD LFDFCERVDL RRVNKRVIEA LIKCGAFDCT GAKRSQLMAG
LEDAASAGQR VQQERESAQA SLFGAAEIVR GANGGGNRLP EIPEWDEKYR LGCEKEAIGF
FITGHPLDRY VADMRRFSSV DCSTILDAKE KSEVRICGVP ASVKELITKK GDRMAFLALE
DLVGSVEVVV FPETYAKCSE VLRGDDPIHV TGTVELSEKG AKVMASDIVL LRDLVERETR
KVNFTIDAKE VDEGKLKTLK DIISRYQGIC RSFLHLDIEN SSRVTIKLPD VYKVSASEEL
TVEVSNLFGY NAVSFE