| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3051 |
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| Symbol | |
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| ID | 6779907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3518599 |
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| End bp | 3521442 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642769045 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002139849 |
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| Protein GI | 197119422 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACAA AGACAGATCT AGCTGACAGA GACGTCGCAA TTCCTCTCAT TGTTTTTATT
TTTGCCGTAT GCGGACTCTA TGTAAGCAGC CTCAGCTCTT ACCTCTTGTT TCATGCCCTG
GTGGAAATCT TCTGCATCCT GGTACTGCTC GGTTCTTTCG TGGTGGCATG GAACTCACGC
AGGCAGCTGG ATAATCACTA CTTCCTGTTT CTCGCCATTT CTTTTCTCTC ATCCGGTACC
TTTGAGCTTT TGCACACCCT GTCCTACAAG GGATTGTCGA TATTCCCAGG GTATGACGCC
AATCTCCCCA CCCAGTTCTG GATAGCTTCG CGATACGTCT TCAGCCTCTC CTTCCTCATA
GCCCCTGTGT TCATCGCCCG CAGGCTTAAG GTGGCGGTTA CGCTGGCTGC ATTCGCCTGC
ATCACCGCCT TGCTGGTCAG CGCCGTATTC TCGGGCAGCT TCCCTGACTG CTTCGTAGAA
GGAGCAGGGT TGACGCCGTT CAAGGTGTAC AGCGAATACG TTATTATCGC CGTCCTGGCA
GCTGCCATCA TGCTGCTGCT TGCCAAGAAG GAGGCGTTCG ATACCCGTGT CCTGCGGGCG
CTCATCTGGT CGCTGACGAC CGCGGCGGCG GCCGATGTGG CCTTCACCAA GTACGTCAGC
GTTTATGGTT CGGCAAACCT CTTGGGGCAT CTCTTTCTCC TTCTGTCCGC CTTCCTGGTA
TACCGGGCCA TCGTGGTGAC GGGGATCGAG GATCCCGCTG CCCTGTTGTT TCGCAGCCTC
GAGCTCAGCA GGGAGCAGTT CCGCAGATCC ATAGCAGACG CGCCCATCCC TGTCATCATG
CATGCCGAGG ATGGCGAGGT GTTACAGGTG AGCGGTTCCT GGACTGAACT CACCGGGTAC
GCTGTGGAAG ATATCCCGAC CCTGAAGGCC TGGCTCGACC GGGCGGTTTC TGCCGCAGAC
TGTGATGCCG TACGCACGGC CGTAAGTGAA CTTTGTGCCG GCAACAGGCA GAGCTTTCGG
TGGGAGATGT CGATTCTCAC CCGTGACGGG CGCTCTCGTT ATTGGAACAT CAGCGCATCT
TCACCGGGAA CCCTGCAGGA TGGCCGGCGT TTCGTGGTCT GCATGGCGGT GGACATCACC
GAGCGCCGGG AAAGTGAAGC CGCCCTGCAA AGAGGGAACC TGCGCCTGGA CCTGCTGGCC
TCCAACGCGA GCAGGCTCTT GGAAAGCGAC GCGCCGCAGC AACTGGTCGA TGAGTTGTGC
CAGAAGGTGA TGTCCTATGT TTCCTGCGAT GCCTATTTCA ACTTCCTGGT AGATGAGCAG
GCGGGATGTC TGCGCTTGAA TGCCTGCGCC GGCATAAGCG CCGCATGCGC GGAGTCCCTG
CGGTACCTAG AGTACGGGGT GGCGGTCTGT GGCTGTGCTG CCAGGGATGC TTGCCGCATA
GTGGCCGAGA ACATTCCGGA GGTGCCAGAT CCACGTACGG AACTGGTGAA ATCGCTCGGC
ATCACGGCCT ATGCCTGTCA TCCTCTCATG TCGCACGGAC GGGTGCTCGG GACTCTCTCC
TTCGGGACCA GGACCAGGAA AACCTTCAGC GAGGACGACC TTTCGCTCAT GAAGGCGGTG
GCGGATCAGG TTTCCATAGC AATGGAGCGA AAAACCACCG AGGAGAATCT GCAGCAGGCC
AAACAGGCGG CAGAAGCGGC CAGCAGGACC AAGAGCCAGT TCCTTGCCAA TATGAGCCAT
GAGCTGAGAA CCCCTATGAC GGGGGTGCTG GGGATGCTGG ACCTGGCACT GCAATCCCCT
TCCGATCTGG AGCGAAGCGA TTACATCCGG ACCGCCTACC GCTCGGGGCG ATCGCTGTTG
CAGATACTGA ACGACATCCT CGATCTCTCC AAGGTGGAAG CCGGGAAGTA TTCGCTGGAT
TTAAAGCCTT TTTCCCTCAA AAGTTGCGTA GCTGAGGCGG TAGATATCGC CGCTCCCGAG
GCGAAGCGCA AGGGGATCGA ACTGGAACTC GACCTCGCGC AGGACCTGCC TGCGCGTGTG
GCCGGCGACC AGGTCAGGCT GCGCCAGGTA CTGACCAACC TGGTCGGCAA CGCCGTGAAG
TTCACGGAGC GGGGGAGGGT AACGGTGCAG GTCGAGGTGG CGGACAAAAC GCCTGAGGGA
GAGTCGCTGC TGCGCTTCCG TGTGAGTGAC ACGGGCATAG GGATTCCGCA GGACAAGAGG
CACCTGCTCT TCCAGGCCTT CAGCCAGATC GACGATTCCA ATACCCGCAA CTACGGGGGG
ACCGGTCTTG GCCTTGCCAT CAGCAAGGAG ATCGTTCAGC GGATGGGAGG GGAGATCGGT
TTCGAAAGCG GGGAGGGGGT GGGAAGCACC TTCACCTTCA CTGCGCGCCT GGTCGTCCCG
CACCCTGACG AACAGCCTGC CGAGGTAGCC GTGAGCGAGA GCGTCGCGCC CGATCCCGGG
GGACAGGAGC TCGCCGGGTT GCGCCTGCTG ATTGCAGAAG ACGACGCCAC TATCAGGCAG
GTGCTGGCAA CGATGCTGCA GAGGCTGCAG TTCTCGGTGG ATTTCGCCGA GGACGGCGCA
AAGGTCGTTG AGATGTGGCG GCAAGGGGAG TACGACCTGA TACTGATGGA TGTGCAGATG
CCGCGTATGG ATGGCTTTCA GGCCACTCGC GCCATCCGGG AACAGGAGCA GGGGGGGCGG
ATTCCCATCA TAGCCATGAC GGCTCATGCC ATGAAAGAAG ACCAGCGGCG CTGCCTCGAC
GCCGGCATGG ACGACTACAT CTCCAAGCCG ATCAACTTCA AGGAGTGCAT CGAAAAGGTG
ATGGGGTTCG CCTGCAGACG GTGA
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| Protein sequence | MATKTDLADR DVAIPLIVFI FAVCGLYVSS LSSYLLFHAL VEIFCILVLL GSFVVAWNSR
RQLDNHYFLF LAISFLSSGT FELLHTLSYK GLSIFPGYDA NLPTQFWIAS RYVFSLSFLI
APVFIARRLK VAVTLAAFAC ITALLVSAVF SGSFPDCFVE GAGLTPFKVY SEYVIIAVLA
AAIMLLLAKK EAFDTRVLRA LIWSLTTAAA ADVAFTKYVS VYGSANLLGH LFLLLSAFLV
YRAIVVTGIE DPAALLFRSL ELSREQFRRS IADAPIPVIM HAEDGEVLQV SGSWTELTGY
AVEDIPTLKA WLDRAVSAAD CDAVRTAVSE LCAGNRQSFR WEMSILTRDG RSRYWNISAS
SPGTLQDGRR FVVCMAVDIT ERRESEAALQ RGNLRLDLLA SNASRLLESD APQQLVDELC
QKVMSYVSCD AYFNFLVDEQ AGCLRLNACA GISAACAESL RYLEYGVAVC GCAARDACRI
VAENIPEVPD PRTELVKSLG ITAYACHPLM SHGRVLGTLS FGTRTRKTFS EDDLSLMKAV
ADQVSIAMER KTTEENLQQA KQAAEAASRT KSQFLANMSH ELRTPMTGVL GMLDLALQSP
SDLERSDYIR TAYRSGRSLL QILNDILDLS KVEAGKYSLD LKPFSLKSCV AEAVDIAAPE
AKRKGIELEL DLAQDLPARV AGDQVRLRQV LTNLVGNAVK FTERGRVTVQ VEVADKTPEG
ESLLRFRVSD TGIGIPQDKR HLLFQAFSQI DDSNTRNYGG TGLGLAISKE IVQRMGGEIG
FESGEGVGST FTFTARLVVP HPDEQPAEVA VSESVAPDPG GQELAGLRLL IAEDDATIRQ
VLATMLQRLQ FSVDFAEDGA KVVEMWRQGE YDLILMDVQM PRMDGFQATR AIREQEQGGR
IPIIAMTAHA MKEDQRRCLD AGMDDYISKP INFKECIEKV MGFACRR
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