| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3042 |
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| Symbol | |
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| ID | 6779898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3508028 |
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| End bp | 3509515 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642769036 |
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| Product | type VI secretion protein, EvpB/VC_A0108 family |
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| Protein accession | YP_002139840 |
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| Protein GI | 197119413 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGAGC AAGATAGGGA ACCGGAAGTA CTGTACGCGG AGCCGCTACC TGCGGGAGGC
CTGCTGGAGC TGATAATCCA GGAAGGGCGA CTTGCCCGCG GCGTCTGTCG CCGTGAGCAT
GCAGTGGACC TTGTGGGCGA ACTGGCGCAG CAGGTCCTTG AGGGGGGGAT GACGGTGAGC
CGCGACACGG AACAGATGAT CAACCAGAGG ATCGCCCAAC TGGACGCGCT CATCTCCGCG
CAGGTTAACG AGATCATCCA CCATCCCGAA TTCCAGAGGT TGGAAGCCTC CTGGCGCGGC
CTTGACCATC TCGTGCACCA AAGCGAGACT GGAGCCAACC TGAAGATCAG GGTTCTGAAC
GTCTCGCGCC GGGACCTAGT GCAGGACATG GAGAAAGCGG CAGAGTTCGA TCAGTCCGCC
CTGTTCAAGA AGGTGTACGA GGAGGAGTTC GGCAGCTACG GCGGGGCTTC CTACGGTTGC
CTGGTGGGTG ACTTCGAATT CGGCAACACG CCGCAGGATC TTTCGCTTTT GACACGGATA
TCCGAGGTCG CGGCTGCCGC GCACGCACCG TTATTGACCG CAGCGTCTCC TTCCCTGTTC
AACATGGAGA CCTTCGGCGA ACTCGACCGG CCCAGGGACT TGGCCAAGAT CTTTCAAGGG
CCGGAATACG CCAAGTGGAA ATCCTTCCGC ATCTCGGAGG ACGCCCGTTA CGTGGCCCTT
TGCCTCCCCC GGGTGCTGAT GCGGCTCCCC TACGGACCCG ACGCCGATCC GGCTGAACTA
TTCCAGTTCA ATGAGGATGT GGACGGCACC GAACACGGCA ATTATCTCTG GGGCAATGCA
GCCTATTGTC TGGCCGAACG GGTGACCGAA GCTTTCGCGA AATACGGCTG GACCGCGGCG
ATCAGGGGAG TGGAAGGTGG CGGTCTTGTG AGCGACCTGC CGGTGCACTG CTTCAAAACG
GGGGAAGGGG AAGTAGCCCA CAAGTGCCCG GCTGAGATTG CCATCACCGA CCGGCGCGAA
AAGGAGCTGG CGGACCTGGG CTTCATCCCG CTGGTCCATT GCAAAGGGAC CGACAACGCC
GCGTTCTTCA GCGCCCAAAG CGCACACCGT CCCAAGAGCT ACGACTCCGA TGCGGCCAAC
GCGAACGCAA GGCTCTCGGC GCAGTTGCAG TACATTCTCG CCGTCTCGCG ATTCGCGCAT
TACCTGAAGG CGCTGATGCG CGACAAGGTC GGCAGCTTCG ACACCAGGAA GAACGTGGAG
GACTACCTCA ACCGCTGGAT CAGCAACTAC GTGCTTCTGG ACGACGACGC CGGCCAGGAG
ATGAAATCGC GCTACCCACT GCGGGAGGCC CGGGTGGAGG TTTTCGAAGA TCCCGCCAAG
CCCGGTGCCT ACCGCGCCGT CGCTTTTTTG AAGCCGCACT TCCAGCTTGA CGAACTTACC
GTCTCGCTGA GGCTTGTGGC CAGCCTGCCG GCACCGGCAA GAGAATAA
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| Protein sequence | MGEQDREPEV LYAEPLPAGG LLELIIQEGR LARGVCRREH AVDLVGELAQ QVLEGGMTVS
RDTEQMINQR IAQLDALISA QVNEIIHHPE FQRLEASWRG LDHLVHQSET GANLKIRVLN
VSRRDLVQDM EKAAEFDQSA LFKKVYEEEF GSYGGASYGC LVGDFEFGNT PQDLSLLTRI
SEVAAAAHAP LLTAASPSLF NMETFGELDR PRDLAKIFQG PEYAKWKSFR ISEDARYVAL
CLPRVLMRLP YGPDADPAEL FQFNEDVDGT EHGNYLWGNA AYCLAERVTE AFAKYGWTAA
IRGVEGGGLV SDLPVHCFKT GEGEVAHKCP AEIAITDRRE KELADLGFIP LVHCKGTDNA
AFFSAQSAHR PKSYDSDAAN ANARLSAQLQ YILAVSRFAH YLKALMRDKV GSFDTRKNVE
DYLNRWISNY VLLDDDAGQE MKSRYPLREA RVEVFEDPAK PGAYRAVAFL KPHFQLDELT
VSLRLVASLP APARE
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