| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3028 |
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| Symbol | |
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| ID | 6779884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3494090 |
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| End bp | 3496354 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642769022 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_002139826 |
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| Protein GI | 197119399 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCAA CAGACACACC TCAATTGCTT GAAATCATAG TCGAAGAAAG CGGGCTGCCG
CGCGGCGGCG TGCTCCAGAC GGTGGCACTT TTGAACGAGG GGGGAACGGT TCCCTTCATC
GCGCGATACC GGAAGGAGCA GACCGGAGAA CTGGACGAGG TCCAGATCCG CCAGATCGAG
GACCTGCTGA TCTATCACCG CGAGCTGTCC GAGCGCAAGG TGACGGTGCT GAAAAGTATC
GAGGAGCAGG GAAAGCTCAC CCCGGAGCTT TCGGCTCGCA TCGCGAGCTG CCGCAAGAAG
ACCGACCTGG AAGACCTGTA CCTCCCCTAC AAGCCGAAGC GCCGCACCAA GGCCACCATC
GCGCGGGAGA AGAGGCTGGA GCCCCTGGCA GAACTGATCG CGGCGCAGGA GTTGACCACG
GGAAGCCCGG CTGAGGCGGC GGCTCCTTTT ATCAACGCCG AGTTGGGCGT ACCCGACGCA
GAGGCCGCCC TGGAAGGGGC TGCACACATC ATCGCCGAGC AGTTGAGCGA GAACGCGGAC
TTGCGCGGCA TGGTGCGCGA CCTTACCAGG GAGCAGGGGA TATTCGGCTC GCTGCTGATC
GGCGAAGGGG CCGACAAAGA CGGCAAGTTC CGGATGTACT ACGACTACCA GGAGCCGCTG
AAGTCGATAC CGTCCCACCG CATGCTCGCC ATGCGGCGCG GCGAAAAGGA AGACGTCTTA
AGGCTCGCCC TGCTGGCGCC GGAAGAGGAG ATCGTCGGGA GGCTGAAGGG GGCGTTGGTC
AAACGGGAGA GCATCTTCAA GGGGATCCTG GAAGCGGCGG CAGCCGACGC CTACAAGCGG
CTCATCGCCC CCTCGATCGA GGTGGAACTG CGGCTTGAGG CAAAGACCCG CGCAGACGAG
GCGGCCATCG CCGTTTTCGC GCAGAACCTG AAGAACCTTT TGCTCCTGCC GCCGGCCGGA
GGGAGGCGGG TGCTGGGGAT CGACCCGGGC CTTAGAACCG GCTGCAAGCT CGCCGCGATC
AGCGAGACCG GGCGCTTTCT GGAGCATGTC ACCATCTACC CGCACACAGG CGGAGCCAAG
GCGGAGGCGG CCGGCGCCGA ACTGGCGGGG ATGGTGCAGC GCAACGACTG CCTTCTCATT
GCCATAGGCA ACGGCACCGG GGGGCGCGAG ACCGAGATCT TCGTGCGCGA CGCATTGAGG
AAGGCGGGGA TAAAGGCGGA GACGGTGATG GTGAACGAGG CGGGCGCCAG CATCTACTCC
GCCTCGGAGA TCGCCAGGGA GGAGTTCCCC GAACTCGACC TGACCGTCCG CGGCGCCATA
TCCATCGGCC GCAGGCTACA GGACCCGCTC GCCGAACTGG TGAAGATCGA CCCCAAGAGC
ATCGGGGTGG GCCAGTACCA GCACGACGTG AACCAGACCC TGCTGAAAAA GGCGCTGGAC
GCGGTGGTGG AATCCTGCGT CAACTTCGTC GGCGTCGACT TGAACAGCGC CTCGTGGGCC
CTGCTCTCCT ACGTCGCCGG CCTCTCGGAA AGGCAGGGGC GGGCCATCGT CAGGCACAGG
GACGAGCAAG GAGCCTTCGC GTCGCGGCAG TCGCTCCTAA AGGTCGCGCG CTTCGGTCCG
AAGGCGTTCG AGCAGGCGGC GGGCTTTTTA CGGATCCGGG GTGGGGAGAA CCCGCTGGAC
AATACTGCGG TACACCCGGA GAACTACGCG GTGGTCGAGA AGATGGCGGC TGACCTCGGG
GTGAGCCTGT CGCAACTGGT GGCGGACCCG GGTCTTTCGG CCGGAATCAG GATCGAGCGC
TACGTGACCG ACACCATCGG CATTCCGACG CTGCGCGATA TCCTGGCGGA GCTTAAGAAA
CCGGGGCGCG ACCCGCGCGA GCAGTTCCAG AGCGCGAGCT TCAGAGAGGA CGTGGTGACC
ATCGCCGACC TGAAGGAGGG GATGATCCTG CAGGGGGTGG TGACCAACGT CGCCGCCTTC
GGCGCCTTCG TGGACATCGG GGTACACCAG GACGGGCTGG TACACGTAAG CCAGCTCTCG
CACCGCTTTA CCAAGGACCC CAACGATGCA GTCAAGGTCG GGGAGATCGT GAAGGTAAAG
CTGCTTTCGG CTGATCCGGA GAGAAAGAGG ATCTCGCTCT CGATCAAGCA GGCGGAGCCC
GAGAAGGCGC CGAAGAGCGC CGAAGTCAGG AAGCCGCAGC CCAAAGAAAA GCCGGTGAAC
GAGCAGTCGG CGTGGGAAAA GGCGGGGTTC AGGGTGAAGA AATAA
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| Protein sequence | MHATDTPQLL EIIVEESGLP RGGVLQTVAL LNEGGTVPFI ARYRKEQTGE LDEVQIRQIE
DLLIYHRELS ERKVTVLKSI EEQGKLTPEL SARIASCRKK TDLEDLYLPY KPKRRTKATI
AREKRLEPLA ELIAAQELTT GSPAEAAAPF INAELGVPDA EAALEGAAHI IAEQLSENAD
LRGMVRDLTR EQGIFGSLLI GEGADKDGKF RMYYDYQEPL KSIPSHRMLA MRRGEKEDVL
RLALLAPEEE IVGRLKGALV KRESIFKGIL EAAAADAYKR LIAPSIEVEL RLEAKTRADE
AAIAVFAQNL KNLLLLPPAG GRRVLGIDPG LRTGCKLAAI SETGRFLEHV TIYPHTGGAK
AEAAGAELAG MVQRNDCLLI AIGNGTGGRE TEIFVRDALR KAGIKAETVM VNEAGASIYS
ASEIAREEFP ELDLTVRGAI SIGRRLQDPL AELVKIDPKS IGVGQYQHDV NQTLLKKALD
AVVESCVNFV GVDLNSASWA LLSYVAGLSE RQGRAIVRHR DEQGAFASRQ SLLKVARFGP
KAFEQAAGFL RIRGGENPLD NTAVHPENYA VVEKMAADLG VSLSQLVADP GLSAGIRIER
YVTDTIGIPT LRDILAELKK PGRDPREQFQ SASFREDVVT IADLKEGMIL QGVVTNVAAF
GAFVDIGVHQ DGLVHVSQLS HRFTKDPNDA VKVGEIVKVK LLSADPERKR ISLSIKQAEP
EKAPKSAEVR KPQPKEKPVN EQSAWEKAGF RVKK
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