Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2996 |
Symbol | |
ID | 6779851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3465330 |
End bp | 3465995 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642768991 |
Product | Resolvase domain |
Protein accession | YP_002139795 |
Protein GI | 197119368 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000012222 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAACCA ATAAATTCGT AAGCTACATC CGTGTTTCTA CAGCTAAACA AGGGACCAGC GGCTTAGGTT TAGAAGCTCA GCGAGAAGCC ATCGGTCGTT TCCTATATGA AGGCCAGTGC GAGCTGTTGC AAGAGTACCG CGAGGTCGAA AGCGGAAAGA AAGCAGATCG CCCCGAGCTT GCAAAGGCGT TGAGGCATTG TCAGGTGACT GGTGCAACGC TGGTGATCGC GAAACTAGAT CGACTGAGCA GAGATCCGGA CTTTCTCGGT GTATTGATGA AAGCAGGGAC TGATTTTGTG GCATGTGACA TGCCCGACGC TAATAAGCTG ACAATCCGTA TCATGGCCGC CTTTGCCGAG CACGAGAGGG AAGCGATAAG CCAGCGAACA AAACTTGCCC TACAGGCTGC AAAGGCACGC GGCATAGTGC TTGGACGGCC AGGAAACCTC AGCAAGCAAG CAGCCGACAA AGGGCGGAAA ATGGGGCGTG CGGCAAAGCT CGCAAAGTCT GCAGAATTTG TCGCACACGT TCGCCCGTTG ATAGAGGCGA TGCGTCCTGA TACGAGCCTT AGGCAGATCG CTGTACGTCT AAATCAGGAT CATGTGAAGA CAGCAACTGG CAAAGGAAAA TGGACAGCAA CCGCAGTCAT GAAAATACTC AAATAG
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Protein sequence | MVTNKFVSYI RVSTAKQGTS GLGLEAQREA IGRFLYEGQC ELLQEYREVE SGKKADRPEL AKALRHCQVT GATLVIAKLD RLSRDPDFLG VLMKAGTDFV ACDMPDANKL TIRIMAAFAE HEREAISQRT KLALQAAKAR GIVLGRPGNL SKQAADKGRK MGRAAKLAKS AEFVAHVRPL IEAMRPDTSL RQIAVRLNQD HVKTATGKGK WTATAVMKIL K
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