| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2903 |
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| Symbol | aspS |
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| ID | 6779756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3348750 |
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| End bp | 3350531 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642768897 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_002139702 |
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| Protein GI | 197119275 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000405553 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGATT TTCTGGGTGA TTGGAAGAGA AGCAGTTACT GCGGCGAGTT GAGGGGGGGC
CACATAGGGC AGGAAGTCAC CCTCATGGGT TGGGTCTCCA AGAGGCGCGA CCACGGCGGG
CTCATCTTCG TCGACCTGCG CGACAGGGAC GGCATCTCCC AGATCGTCTT CGACCCGGAG
CGCTGTCCCG AGGCCCACGC CAAGGCGGAG TCCGCCAGGA ACGAGTACGT CCTTGCCATC
AGGGGTACGG TTGCCGCCCG CCCGGAAGGG ACCGTCAACC CGAAGATGAA GACCGGCGAG
ATCGAGGTGC TGGTGACCGA GTGCAAGCTT TTGAACCCCT CCAAGGCGCT CCCTTTCACG
CTGGACGGCT TCGTGGACGT CAACGAGAAC ATCAGGCTCA AGTACCGCTA TCTCGACCTT
CGCACCGGGA CGCTGCAGCA GAACCTGATG CTCCGCTCCA AGGTGGCCCA GTTGACCCGC
TCCTACTTGA GCGACAACGG CTTCATCGAA CTGGAGACCC CTTTCCTCAC CAAGTCCACC
CCGGAAGGGG CGCGCGACTT CCTGGTTCCC TCCCGCATCA ACAAGGGCGA GTTCTACGCG
CTGCCGCAGT CCCCGCAGCT CTTCAAGCAG ATCCTCATGG TCTCCGGCTT TGACCGCTAC
TTCCAGATCG TGCGCTGCTT CCGCGACGAG GACCTGCGCG CCGACCGCCA GCCCGAGTTC
ACCCAGATCG ACTGCGAGAT GTCCTTCATC GACCGCGAGG ACATCATCAC CGTGATGGAA
GGGCTCATGG CCCGCATCTT CACCGAGGCC AGAGGGGTCA AGGTTGAGCT CCCGATCGAG
AGGATGACCT ACCAGGAGGC GATCCGCCGC TTCGGCGTGG ACAACCCGGA CCTTCGTTTT
GGGCTCGAAC TGGTAGAGCT CTCCGACATC GTCAAGAACT CCGGTTTCAA GGTCTTCGCC
GACGTGGTGA ACGGCGGCGG GATCGTCAAG GGTATGAACG TCAAGGGCGC CGGCGCCATG
AGCCGCAAGG AAATCGACGA CCTGACCGAG TTCGCCAAGA TCTACGGCGC CAAGGGTCTC
GCCTACGTGA AGATGACCGC CGAAGGGTGG CAATCCCCCA TCGCCAAGTT CTTCACCCCC
GAAGAGATCG CCACCATGGA TAAGGCCTTC GACGCCAAAG AAGGGGACCT GCTCCTCTTC
GTCGCCGACA AGCCGAAGGT GGTCAACGAT TCGCTGGGCA AACTCAGGAA TCATCTCGCC
GCCAAGATGG GGCTCACCGA TCCCAACGTC TTCCGCTTCG TCTGGATCAC CGACTTCCCG
CTTCTCGAGT GGGACGAGGA AGCGAAACGC TGGGCGGCGG TGCACCACCC CTTCACCGCG
CCCATGGACG AGGACCTGCA GTACGTCGAG AGCGATCCCG GCCGCTGCCG CGCCAAGGCC
TACGACCTGG TCCTTAACGG CAACGAGATC GGCGGCGGCT CCATCAGGAT CCATCAGGAG
GAAGTGCAGT CCCTCATGTT CAAGATGCTG GGGCTCTCCG AGGAGAACGC CCGCTCCAAG
TTCGGCTTCC TGCTCGACGC GCTCGAGTAC GGCACCCCGC CGCACGGCGG CATCGCCTTC
GGCCTGGACC GCCTGATGAT GCTGATCACC GGTAGCGACT CGATCCGCGA CGTCATCGCT
TTCCCGAAGA CCCAGAAGGG GGCCTGCCTC ATGTCGGACG CCCCCTCCGG TGTCGATGCA
CTGCAGCTGC GCGAGCTCGG CATTCGTCTC GCCGCCAAGT AG
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| Protein sequence | MIDFLGDWKR SSYCGELRGG HIGQEVTLMG WVSKRRDHGG LIFVDLRDRD GISQIVFDPE
RCPEAHAKAE SARNEYVLAI RGTVAARPEG TVNPKMKTGE IEVLVTECKL LNPSKALPFT
LDGFVDVNEN IRLKYRYLDL RTGTLQQNLM LRSKVAQLTR SYLSDNGFIE LETPFLTKST
PEGARDFLVP SRINKGEFYA LPQSPQLFKQ ILMVSGFDRY FQIVRCFRDE DLRADRQPEF
TQIDCEMSFI DREDIITVME GLMARIFTEA RGVKVELPIE RMTYQEAIRR FGVDNPDLRF
GLELVELSDI VKNSGFKVFA DVVNGGGIVK GMNVKGAGAM SRKEIDDLTE FAKIYGAKGL
AYVKMTAEGW QSPIAKFFTP EEIATMDKAF DAKEGDLLLF VADKPKVVND SLGKLRNHLA
AKMGLTDPNV FRFVWITDFP LLEWDEEAKR WAAVHHPFTA PMDEDLQYVE SDPGRCRAKA
YDLVLNGNEI GGGSIRIHQE EVQSLMFKML GLSEENARSK FGFLLDALEY GTPPHGGIAF
GLDRLMMLIT GSDSIRDVIA FPKTQKGACL MSDAPSGVDA LQLRELGIRL AAK
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