Gene Gbem_2892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2892 
SymbolispG 
ID6779745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3335590 
End bp3336615 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content62% 
IMG OID642768886 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_002139691 
Protein GI197119264 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGGGA ATATCCCGGT TGGCGGAGGT GCTCCCTGCT CCGTCCAGTC CATGTGCTCA 
ACCGACACCC GTGATGTCGC GGCAACCCTT GGGCAGATCG GCCGGCTTGC CGCCGCCGGA
TGCGAGATCG TGCGCTGTGC GGTGCCGGAT ATGGACGCCG CCCTGGCCCT TGCCGCCATA
AAGGCCGGCT CCCCCATGCC GCTCATAGCC GACATACATT TCGACTACAA GCTTGCCTTG
AAGGCCCTGG AGTCCGGGGT GGACGGGCTC CGTCTCAACC CCGGCAACAT AGGCGAAAAG
TGGAAGGTTG CCGAGGTGGT GAAAGCCGCG GCCGAGCGCA ACGTTCCCAT CCGCATCGGC
GTCAACGGCG GTTCGCTGGA AAAGGAACTG CTGGTGAAGT ACGGGCACCC GACTCCCGAG
GCCATGGTCG AATCGGCGCT GGGGCATGTG CGGATCCTCG AGGAACTGGG CTATCAGCAG
ATAAAGATAT CGATCAAGGT CTCCGACGTA TTGCGGACCC TGGAGGCGTA CCGGCTTCTT
TCCGACGCCG TTGACTACCC TCTGCACATA GGCGTTACCG AGGCCGGAAC CATCTTCGCC
GGAACCGTCA AGTCCTCCGT AGGTCTGGGA ATACTTCTTA ACCAGGGGAT CGGCGACACC
ATGCGGGTCT CCCTCACCGG CGATCCGGTT GACGAGGTGC GGGTAGCGTA CGACATACTC
AAATCGCTCG GTTTGCGGAC CCGCGGCATC AACTTCGTCT CCTGCCCCAC CTGTGGGCGT
TGCCAGGTGA ACCTGATACC CGTAGCCGAG GAAGTAGAGC GGCGCCTGGC GCATCTGGAT
ACAACGATCA CCGTCGCCGT CATGGGGTGC TCCGTCAACG GACCCGGCGA GGCTCGCGAG
GCCGACTTCG GCATAGCCGG GGGTAGGGGA GAAGGGCTTC TCTTTCGGCA CGGCGAGATC
CTGCGCAAGG TCCCCGAAGC CGAGCTAGCC GATGCCTTGG TGGAAGAAGT CTTAAAAAAT
CAGTAG
 
Protein sequence
MIGNIPVGGG APCSVQSMCS TDTRDVAATL GQIGRLAAAG CEIVRCAVPD MDAALALAAI 
KAGSPMPLIA DIHFDYKLAL KALESGVDGL RLNPGNIGEK WKVAEVVKAA AERNVPIRIG
VNGGSLEKEL LVKYGHPTPE AMVESALGHV RILEELGYQQ IKISIKVSDV LRTLEAYRLL
SDAVDYPLHI GVTEAGTIFA GTVKSSVGLG ILLNQGIGDT MRVSLTGDPV DEVRVAYDIL
KSLGLRTRGI NFVSCPTCGR CQVNLIPVAE EVERRLAHLD TTITVAVMGC SVNGPGEARE
ADFGIAGGRG EGLLFRHGEI LRKVPEAELA DALVEEVLKN Q